Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq490 150 4e-31 seq934 145 2e-29 seq712 141 2e-28 >seq490 Length=13136524 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || ||||| || ||||| || || ||||| || ||| Sbjct 10199188 CAAATCTTCGTCAAGACCCTGACCGGAAAGACCATCACGCTGGAAGTGGAGCCATCGGAC 10199129 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || ||||||||||| || ||||| ||||||||||| ||||| Sbjct 10199128 ACTATCGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCGGATCAGCAG 10199069 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| ||||| |||||||| | || || | || || || || Sbjct 10199068 CGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGTACCCTGTCAGACTACAATATC 10199009 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 10199008 CAGAAGGAGTCCACTCTCCATCTGGT 10198983 Score = 136 bits (150), Expect = 1e-26 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || ||||| || ||||| || || ||| Sbjct 5732716 CAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCGGAC 5732775 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||||||| || ||||| |||||||| || |||||||| || || ||||| Sbjct 5732776 ACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAG 5732835 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| |||||||| || || ||| | ||||| |||| || ||| || Sbjct 5732836 CGTCTGATCTTCGCCGGCAAACAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATC 5732895 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||| |||| Sbjct 5732896 CAGAAGGAGTCGACCTTGCA-CTTG 5732919 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || ||||| || ||||| || || ||| Sbjct 5732260 CAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCGGAC 5732319 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||||||| || ||||| |||||||| || |||||||| || || ||||| Sbjct 5732320 ACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAG 5732379 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || ||| | ||||| |||| || ||| || Sbjct 5732380 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATC 5732439 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||| |||| Sbjct 5732440 CAGAAGGAGTCGACCTTGCA-CTTG 5732463 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || ||||| || ||||| || || ||| Sbjct 5732488 CAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCGGAC 5732547 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||||||| || ||||| |||||||| || |||||||| || || ||||| Sbjct 5732548 ACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAG 5732607 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || ||| | ||||| |||| || ||| || Sbjct 5732608 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATC 5732667 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||| |||| Sbjct 5732668 CAGAAGGAGTCGACCTTGCA-CTTG 5732691 Score = 127 bits (140), Expect = 5e-24 Identities = 152/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || | || || || || ||||| || ||||| || || ||| Sbjct 5730914 CAGATCTTCGTGAAGACGTTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCGGAC 5730973 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||||||| || ||||| |||||||| || |||||||| || || ||||| Sbjct 5730974 ACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAG 5731033 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || ||| | ||||| |||| || ||| || Sbjct 5731034 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATC 5731093 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||| |||| Sbjct 5731094 CAGAAGGAGTCGACCTTGCA-CTTG 5731117 >seq934 Length=8401807 Score = 145 bits (160), Expect = 2e-29 Identities = 156/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| ||||| || || || ||||| || ||||| || ||| ||| Sbjct 268646 CAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACGCTTGAGGTCGAGCCCTCGGAC 268587 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| || |||||||| ||||| ||||| Sbjct 268586 ACGATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGATCAGCAG 268527 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || ||||| || ||||| | ||||| | || || ||| || Sbjct 268526 CGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAACATC 268467 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || || || |||| Sbjct 268466 CAGAAGGAATCGACCCTTCA-CTTG 268443 >seq712 Length=12093160 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| ||||| || || ||||| ||||| ||||| || ||| || Sbjct 3459790 CAGATCTTCGTCAAAACCCTCACGGGTAAGACGATTACCCTTGAGGTCGAGCCCTCGGAT 3459731 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| || || ||||| |||||||| || || ||||| ||||| ||||| Sbjct 3459730 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGATCAGCAG 3459671 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | || || |||| || ||| || Sbjct 3459670 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTACAACATC 3459611 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 3459610 CAGAAGGAGTCGACCCTTCATCTGGT 3459585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203711674727604