Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2119 100 3e-16 >seq2119 Length=1501809 Score = 100 bits (110), Expect = 3e-16 Identities = 269/409 (66%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 |||||| ||||| || || || || |||| | || |||||||| || | | || Sbjct 1234828 ATCCGCCACAAACTCGATGTACTGCGACATCAGATCACAGTTCATGCCGAGCATGTCAAC 1234887 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 || || || | ||||| ||| ||||| || || || || || ||||| | Sbjct 1234888 GGGCAGTGCCTTCGTCAGAAACTCCTGCTCGATCACGACAGCATCGCGGATAATCTCCGT 1234947 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || || |||| ||||| | || |||| || ||||||||||| || || || || Sbjct 1234948 CACGCGCTCCTTCGACGGCTTCTGAACCAGATACTTGAACATCAGACAGGCAAAGTCACA 1235007 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 |||| || ||||| | || || ||||| || || || | || |||||| || Sbjct 1235008 GTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCCAGGCATCAGGCC 1235067 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 || ||||| | ||| || || | ||||| ||| ||||| ||||| || |||| Sbjct 1235068 ACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTTCCACTGAAGAAGATACCTTCAACGGC 1235127 Query 17098 TGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCA 17156 |||||||| | | |||||| | | | || | ||| | ||| ||||| ||| | Sbjct 1235128 GGCAAACGCCACAACCCGTTCGCCAAAGTTGGCCTTCTTGCT-CGAGATCCAGTTCAGTG 1235186 Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 |||| || || || | ||| | ||| || |||||| ||||| ||||| Sbjct 1235187 CCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGCGTTAAA 1235235 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||| ||||| || || |||||| ||| ||| | || ||||| || ||||| Sbjct 1235336 ATGTACGTGTCGATCAGCAGCGAGTACATCTCGCTGTGCACATTTTCCATCGCAATCTGG 1235395 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || |||| || || || ||| | ||| |||||| | ||| Sbjct 1235396 AAGCCGTAGAAGCAGCGCGCCTCCGTTACCTGCACCTCCTGGCTGAAGCGTTCCACCAGA 1235455 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||||||||||||||||| ||| ||| || || || || Sbjct 1235456 TTTTCGTTCACGATGCCATCGGACGCAGCAAAGAAGGC 1235493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517528307507640