Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1669 89.7 5e-13 >seq1669 Length=235595 Score = 89.7 bits (98), Expect = 5e-13 Identities = 179/261 (69%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTGGAGTCC 118994 ||||||||||| || || ||||| | ||||||||||| | ||| ||||| | || Sbjct 204648 TTCATGTATCGAATTTTGCCAAAGATTTCGCGCTCCTTCCA-ACCCTGATCGTGAATACC 204706 Query 118995 TGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTT 119054 || | | ||| | || || ||||| ||||| ||||| || || | ||| Sbjct 204707 GGCGATCGACCACATGCAACCGACGTACCCGTTTGGATCGCGCCCATCCAGGCTATACCG 204766 Query 119055 ATCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCCGGAGTCTTACTCCATTCCAGT 119112 |||||| | ||||| | || | | || ||| || || || || |||| |||||| Sbjct 204767 ATCGTTAAGATAGAT--CGCCGTCTCAAGCGCTTCCTCGGGCGTTTTCGTCCACTCCAGT 204824 Query 119113 AtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGA 119172 || ||||| ||||| ||||| || | | || ||||| || ||||| || | |||||| Sbjct 204825 ATCTTTTTCGCCCAATACATCCGCAGGAAGCCATGCATCTTGCCCTCCTTCACCATCTGC 204884 Query 119173 AGTTGTGCGGTGTTCCATAGA 119193 || || || | |||||| ||| Sbjct 204885 AGCTGCGCCGAGTTCCACAGA 204905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511397312366360