Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1391 334 9e-87 seq2119 118 1e-21 >seq1391 Length=279726 Score = 334 bits (370), Expect = 9e-87 Identities = 851/1284 (66%), Gaps = 17/1284 (1%) Strand=Plus/Plus Query 53390 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 53449 || || ||||| ||||| || | || | || || || || || | || || || Sbjct 2284 TACGTTTCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAGCTTCCAGCGCTCCATAG 2343 Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 53509 || ||||||||||| |||| | || || | ||| || ||| ||| || | ||||| Sbjct 2344 TAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCTCGCTTTCGTACGGATAG 2403 Query 53510 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 53569 | | || ||||| || || | || || ||||| || ||||| ||||| || | | Sbjct 2404 CGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCCGATGGGTCTGTGGCGC 2463 Query 53570 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGG 53629 | || ||| | ||| || || | ||| || || |||| || || ||||| || || Sbjct 2464 ATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTAGTTAACGTCAATGATTTTGTTCAGA 2523 Query 53630 TTTC-TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----TTGTCCAT 53684 || | || || | | |||| |||| |||||||| || |||||| | |||||| Sbjct 2524 TTGCGTGTCACT-ATTTTGGCCACTTCCTTCAGCTTAGCAAAATCGTACGTTTTGTCCTG 2582 Query 53685 CTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT--TAGC 53742 || |||| |||||||||| ||||| || || ||||| || || |||| || | | | Sbjct 2583 CT-TTACGAACATGTTCAGCGCAATCGAGGCTAGATTGCACACCGCTATTTCGTCCTTGG 2641 Query 53743 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 53802 | || || | | ||||| ||||| || || |||||||||||| || | || || Sbjct 2642 A--CGAGTACTCCACAATCTCGGTGCACAGGTTGGAACACTTGATGGTGCCAATGTTCTG 2699 Query 53803 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAAT 53862 ||||| ||||| |||||||||||||| || || ||| | || ||| ||||||| Sbjct 2700 CTGATTGCTCTTACGATTACACGCATCCTTGTACAGCATGTACGGTACACCCGTTTCAAC 2759 Query 53863 CTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTAT-TATAGATTTGTATCTCT 53921 ||| || || || || || ||| | | | | ||||| | | | || | | Sbjct 2760 CTGCGACTCGATGATAGCAAACCATAGGTCCTGCGCCTTCACCTGTCGAATAAAGCGACC 2819 Query 53922 TTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATC 53981 | || | ||||| || |||| || ||||| || ||||| || | |||||| Sbjct 2820 CTCCT-TCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCACGAATCGGCCAATC 2878 Query 53982 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 54041 | ||||| || | ||||||||||| |||| | ||| ||| || || ||||| | Sbjct 2879 CGGGACAGTCGTGCGGACACATCAGACTCCACATTTCGTTCGCCTCGACACGCTTCATGA 2938 Query 54042 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 54101 | ||||| || ||||| || || ||| | || | || || || || || || | Sbjct 2939 ACAGATCCGGTATCCAGAGGGCGTAAAACATGTCCCGGGCTCGCACCTCTTCTTTGCCGG 2998 Query 54102 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 54161 | || || ||||||||||| ||| | | ||||| |||||||| || | || || | Sbjct 2999 TGTTTTTCTTAAGATCGAGAAACTCGAATATATCTCCGTGCCACGGCTCGAGATAGATAG 3058 Query 54162 TCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 54221 | |||||||||||||||| || ||||| || | || | || || || || || | Sbjct 3059 CGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCGACATACCGTGCCGTATTGTTGTACA 3118 Query 54222 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 54281 | | |||||| || | | || || || || || || || || || || |||| Sbjct 3119 CGCGCAACATCGGCACCAGTCCGTTTGAAATTCCGTTCGTACCAGATATGTACGTTCCCT 3178 Query 54282 TGGCACGAAT--ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGC 54339 | || || || | | | || | | || || || || || ||| || || | || Sbjct 3179 TCGCGCGGATGCAGTGCACGTTCA--GGCCAATACCACCGGCAGATTTGGAAATAAGGGC 3236 Query 54340 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 54399 || | || | |||||| ||||| ||||| ||||| ||||| |||| | || ||||| Sbjct 3237 ACACTGCTTGAGCGTATCGTAGATACCCTCGATACTGTCATCGGACATGGTCAGCAGAAA 3296 Query 54400 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 54459 |||| ||||| ||| | || || |||| ||| | ||| || ||||| || || Sbjct 3297 ACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCGCAAACATGGTCGGTGAAGCATGGGT 3356 Query 54460 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATG 54519 || | || || || ||||||||||| ||||| |||| || || || || Sbjct 3357 GAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGATCGCTGCATCGATGTCTTCGCCGTG 3416 Query 54520 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 54579 || || | ||||| ||||| | ||||||||| || | || || ||||| || || Sbjct 3417 GATACCGATGGCGACGCGCATCAGCATGTGCTGTGGCCGCTCGACAATCTTACCCTTGAT 3476 Query 54580 TTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 54639 |||||||| || ||| |||||| |||||||| || ||||||||||| ||| || || Sbjct 3477 CTTCAGCAAATACGATCGTTCCAAGGTTTTAAATCCGAAATAGTTGTACCCAAAATCGCG 3536 Query 54640 TTCGTAAATAATAACTGAGTTGAG 54663 |||||||| || | ||||| || Sbjct 3537 ATCGTAAATGATCGCCGAGTTCAG 3560 >seq2119 Length=1501809 Score = 118 bits (130), Expect = 1e-21 Identities = 183/259 (71%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 24123 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 24182 || ||||||| ||| || || || |||||||| || ||||| | ||| | ||||| Sbjct 1234982 TTGAACATCAGACAGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 1235041 Query 24183 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 24242 || || |||||||| ||||| ||||||||||| || ||||| || || || || || | Sbjct 1235042 GAGAAGGTGAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTT 1235101 Query 24243 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG 24302 ||| ||||| || ||||| || || ||||| || | || | ||| ||| | ||| Sbjct 1235102 CCACTGAAGAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGC- 1235160 Query 24303 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 24357 || || || ||||| || | ||||| || |||||||| || || || |||| | Sbjct 1235161 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 1235219 Query 24358 TCTCTATAGCATTAAAGAG 24376 | || || || ||||| || Sbjct 1235220 TTTCGATGGCGTTAAACAG 1235238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593701762277040