Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2119 237 2e-57 seq147 136 4e-27 seq2452 109 6e-19 seq890 82.4 8e-11 >seq2119 Length=1501809 Score = 237 bits (262), Expect = 2e-57 Identities = 310/429 (72%), Gaps = 0/429 (0%) Strand=Plus/Minus Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005 |||| ||||||||||| ||| |||||||||| || ||||||| || ||||| ||| || Sbjct 1235237 TGTTTAACGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCACTGAACT 1235178 Query 117006 GGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGG 117065 ||||| | ||| ||||| ||| ||||| || | ||||| || || ||||| || | Sbjct 1235177 GGATCTCGAGCAAGAAGGCCAACTTTGGCGAACGGGTTGTGGCGTTTGCCGCCGTTGAAG 1235118 Query 117066 GCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGC 117125 | ||||||| || || ||||| | || || ||||| ||||| || ||||| |||| Sbjct 1235117 GTATCTTCTTCAGTGGAAGCTTCGCTTCAATCTTCTGGCTGAAGAAGCGTGGCCTGATGC 1235058 Query 117126 CCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTG 117185 | || || || ||| |||||||| || || | ||||| || || || || ||||||| Sbjct 1235057 CTGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTACACTGTGACTTTG 1234998 Query 117186 CCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCG 117245 ||||| || |||||||| || |||| ||| ||| || |||||| | |||||| Sbjct 1234997 CCTGTCTGATGTTCAAGTATCTGGTTCAGAAGCCGTCGAAGGAGCGCGTGACGGAGATTA 1234938 Query 117246 TCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGC 117305 || ||| || |||| ||||||||| || || || | || ||||| || ||| Sbjct 1234937 TCCGCGATGCTGTCGTGATCGAGCAGGAGTTTCTGACGAAGGCACTGCCCGTTGACATGC 1234878 Query 117306 TGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGC 117365 | || | || || || ||||||||| ||||||||||| || || || | |||||| Sbjct 1234877 TCGGCATGAACTGTGATCTGATGTCGCAGTACATCGAGTTTGTGGCGGATCGTTTGCTGC 1234818 Query 117366 TCGAGCTGG 117374 ||||||||| Sbjct 1234817 TCGAGCTGG 1234809 Score = 212 bits (234), Expect = 6e-50 Identities = 217/281 (77%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714 |||| || || ||||||||||| || |||||||| || ||||||||||| | || || | Sbjct 1235600 AGGCGGAAGCTTCGTTCTGGACGGTGGAGGAGGTCGATCTGTCCAAGGATATGAAGGATT 1235541 Query 116715 GGGA-GCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCC 116773 |||| ||||| ||| | |||||| || || ||| |||||||| ||||| || || Sbjct 1235540 GGGATGCGCTGAAACCG-AGCGAGCGTCACTTTATCTCTCACGTGCTTGCCTTCTTTGCT 1235482 Query 116774 GCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTG 116833 || ||| |||||||| ||||| |||||||| || || ||| |||||||||||||| Sbjct 1235481 GCGTCCGATGGCATCGTGAACGAAAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGGTA 1235422 Query 116834 GCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATG 116893 | |||||||| |||||||||||||| ||||| || ||||| || |||||| || ||| Sbjct 1235421 ACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGCGAGATG 1235362 Query 116894 TATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 || ||| || |||||||||||| | ||| |||| |||| Sbjct 1235361 TACTCGCTGCTGATCGACACGTACATCCGCGATTCGAAGGA 1235321 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 || |||||||| || |||||||| ||||||||||| |||||||| || ||||||||| Sbjct 1235757 GAACCGCTGCTTATGGACAACCCCCGGCGGTTCGTGATCTTCCCCATCCAGTACCCGGAC 1235698 Query 116636 ATGTGGCGCATGTACAAAAAGG 116657 || |||| ||||||||||||| Sbjct 1235697 ATATGGCAAATGTACAAAAAGG 1235676 >seq147 Length=443619 Score = 136 bits (150), Expect = 4e-27 Identities = 162/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||| ||||| || ||||| ||||| || || ||||| |||||||| |||| ||||| Sbjct 111694 GAAACATGCAGATTTTCGTGAAAACTCTTACTGGCAAGACCATCACACTCGAGGTCGAGC 111753 Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | | |||| | | | | |||| || || | ||||| || ||||| ||| | | Sbjct 111754 CTTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAG 111813 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | ||||| |||||||||| ||| ||||| |||||||| || | ||||| ||| || | Sbjct 111814 ATCAGCAGCGACTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCTGATT 111873 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||||||| | || || ||||| ||| |||| Sbjct 111874 ACAACATCCAGAAGGAATCGACCCTTCATCTGGTGCTGCG 111913 >seq2452 Length=1332465 Score = 109 bits (120), Expect = 6e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| |||||||| || ||||| ||| | || ||||| || Sbjct 204095 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 204036 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | ||| | |||| || || | || || ||||| || || |||| Sbjct 204035 TCGGATACGATCGAAAATGTGAAGGCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGAT 203976 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || || || || || | || ||||| |||||||| || | ||||| || ||| ||| Sbjct 203975 CAACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGTCCGATTAC 203916 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||| | || || ||| | ||| | ||| || | || || Sbjct 203915 AACATCCAGAAGGAGTCGACCCTTCATTTGGTGCTTCGCCTGCGCGGTGG 203866 >seq890 Length=1089215 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 40786 AAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGAC 40845 || ||||||||||| | || ||||| || || |||| || ||||| |||||||| || Sbjct 230248 AAGGAGGGCATCCCACCAGATCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGAT 230307 Query 40846 GAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 | ||||| || ||||| ||||| |||||||| ||||||| ||||| || Sbjct 230308 GGTCGCACTCTTTCGGACTATAACATTCAGAAGGAATCCACGCTCCATCTGGT 230360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515201985238480