Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1669 100 4e-16 >seq1669 Length=235595 Score = 100 bits (110), Expect = 4e-16 Identities = 170/251 (68%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 202760 ACATCAAATTTACGTCTACATCCTTCATAACTCATATATCTAATTTTACCAAATATTGGT 202819 |||| |||||||| ||||||||||||| |||| |||| |||||| ||||| ||| Sbjct 204618 ACATTGAATTTACGCTTACATCCTTCATAGTTCATGTATCGAATTTTGCCAAAGATTTCG 204677 Query 202820 CTTTCTTTCCATGCTCTATCATGAATACCACAAATTGACCACATACATCCAACATATCCA 202879 | || ||||| | ||| |||||||| || |||||||| || || || || || Sbjct 204678 CGCTCCTTCCAACCCTGATCGTGAATACCGGCGATCGACCACATGCAACCGACGTACCCG 204737 Query 202880 TTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNNNNNNNNAATGCT 202939 |||||||| || ||||| | ||| ||| || | || | ||| Sbjct 204738 TTTGGATCGCGCCCATCCAGGCTATACCGATCGTTAAGATAGATCGCCGTCTCAAGCGCT 204797 Query 202940 TCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATTCTTAAATATCCA 202999 || || || | ||| ||||| || | ||| ||||| ||||||||||| | | | ||| Sbjct 204798 TCCTCGGGCGTTTTCGTCCACTCCAGTATCTTTTTCGCCCAATACATCCGCAGGAAGCCA 204857 Query 203000 TGCATTTTACC 203010 ||||| || || Sbjct 204858 TGCATCTTGCC 204868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755430758326400