Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1669 114 2e-20 >seq1669 Length=235595 Score = 114 bits (126), Expect = 2e-20 Identities = 208/302 (69%), Gaps = 2/302 (1%) Strand=Plus/Minus Query 189435 AAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGC 189494 |||| ||||| ||| |||||| || | || |||||||||||| || || || |||| Sbjct 204918 AAACGCATGACGATCTGTGGAACTCGGCGCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 204859 Query 189495 ATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAG 189554 || | || | || ||||||||||| || |||||||| || ||||| | ||| || || | Sbjct 204858 ATGGCTTCCTGCGGATGTATTGGGCGAAAAAGATACTGGAGTGGACGAAAACGCCCGAGG 204799 Query 189555 ACGC-TTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCT 189613 | || ||||| | |||||| | ||| | ||| || || || ||||| Sbjct 204798 AAGCGCTTGAGACGGCG-ATCTATCTTAACGATCGGTATAGCCTGGATGGGCGCGATCCA 204740 Query 189614 AACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAA 189673 ||||| ||||| ||||| |||||||| || ||| | |||||| | ||||| || Sbjct 204739 AACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGTATTCACGATCAGGGTTGGAAGGAG 204680 Query 189674 AGACCGATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGAT 189733 | || ||||| || || |||| ||||| ||||| | | |||| ||||| || Sbjct 204679 CGCGAAATCTTTGGCAAAATTCGATACATGAACTATGAAGGATGTAAGCGTAAATTCAAT 204620 Query 189734 GT 189735 || Sbjct 204619 GT 204618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923165953686920