Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq147 104 3e-17 seq1435 102 9e-17 seq1347 102 9e-17 seq2219 100 3e-16 seq1001 100 3e-16 seq2131 98.7 1e-15 seq1944 98.7 1e-15 seq335 98.7 1e-15 seq1897 96.9 4e-15 seq347 91.5 2e-13 >seq147 Length=443619 Score = 104 bits (114), Expect = 3e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||||| ||| | || ||||| || || |||||||||| ||||| || | Sbjct 111913 CGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCA 111854 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| || ||||| |||||||||||||| || | || | || |||||| Sbjct 111853 TCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGGGAATGCCTTCCTTG 111794 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || || | || | | |||||| | || || |||| |||||| Sbjct 111793 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCGAGTGTGATG 111734 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACGCCGAATACAA 43200 || ||||| || || || || || || || ||||| ||| || || |||| Sbjct 111733 GTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCATGTTTCTGCGGATCACAA 111682 >seq1435 Length=268643 Score = 102 bits (112), Expect = 9e-17 Identities = 73/83 (88%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 70168 TTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 70109 Query 60124 TATACTACCGAGGA--TTGAATA 60144 ||||||| |||||| ||||||| Sbjct 70108 TATACTATCGAGGATGTTGAATA 70086 Score = 100 bits (110), Expect = 3e-16 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60058 AAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 || |||||| ||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 71435 AAGATTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 71376 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||| ||||||| Sbjct 71375 TGACCACTATACTATCGAGGAT 71354 Score = 100 bits (110), Expect = 3e-16 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120 ||| ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| || Sbjct 72246 ATTGTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGAC 72187 Query 60121 CACTATACTACCGAGGAT 60138 |||||||||| ||||||| Sbjct 72186 CACTATACTATCGAGGAT 72169 Score = 98.7 bits (108), Expect = 1e-15 Identities = 76/88 (86%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 60053 TATGAAAA--ATTT-TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCG 60109 ||| |||| |||| ||||| || | ||||||||||||| |||||||||||||||||||| Sbjct 74042 TATAAAAACTATTTCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCG 73983 Query 60110 GACATACTCACCACTATACTACCGAGGA 60137 | ||||| |||||||||||| |||||| Sbjct 73982 GGGATACTGACCACTATACTATCGAGGA 73955 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 68937 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 68878 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 68877 TACTATCGAGGA 68866 >seq1347 Length=266621 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 216115 AAAAACTCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 216174 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||| |||||| Sbjct 216175 TGACCACTATACTATCGAGGA 216195 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 215504 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 215563 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 215564 TACTATCGAGGA 215575 Score = 95.1 bits (104), Expect = 1e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||| |||| | ||| || | ||||||||||||| ||||||||||||||||||||| ||| Sbjct 216407 AAAGATTTCCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 216348 Query 60116 CTCACCACTATACTACCGAGGA 60137 || |||||||||||| |||||| Sbjct 216347 CTGACCACTATACTATCGAGGA 216326 >seq2219 Length=695684 Score = 100 bits (110), Expect = 3e-16 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||| |||||| ||| || | ||||||||||||| ||||||||||||||||||||| ||| Sbjct 327979 AAAGATTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 327920 Query 60116 CTCACCACTATACTACCGAGGA 60137 || |||||||||||| |||||| Sbjct 327919 CTGACCACTATACTATCGAGGA 327898 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 541869 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 541928 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 541929 ATACTATCGAGGA 541941 >seq1001 Length=1072909 Score = 100 bits (110), Expect = 3e-16 Identities = 73/84 (87%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 ||| ||||||||||| | | ||||||||||||| ||||||||||||||||||||| | Sbjct 710627 AAACATTTTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 710568 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| |||||||||||| |||||| Sbjct 710567 TACTGACCACTATACTATCGAGGA 710544 >seq2131 Length=706443 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 487316 TTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 487375 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 487376 TATACTATCGAGGA 487389 >seq1944 Length=188785 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 73552 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 73493 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 73492 ATACTATCGAGGAT 73479 >seq335 Length=1191755 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 338302 TTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 338361 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 338362 TATACTATCGAGGA 338375 >seq1897 Length=2554132 Score = 96.9 bits (106), Expect = 4e-15 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1607203 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1607144 Query 60126 TACTACCGAGGAT-TGAA 60142 ||||| ||||||| |||| Sbjct 1607143 TACTATCGAGGATGTGAA 1607126 >seq347 Length=396583 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 229107 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 229048 Query 60125 ATACTACCGAGGA 60137 |||||| | |||| Sbjct 229047 ATACTATCAAGGA 229035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571798494144440