Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1391 829 0.0 seq2119 201 1e-46 seq147 127 2e-24 >seq1391 Length=279726 Score = 829 bits (918), Expect = 0.0 Identities = 1359/1954 (70%), Gaps = 43/1954 (2%) Strand=Plus/Plus Query 22103 GTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 || |||||||| ||||| || || || || | ||||| |||||||| | || |||||| Sbjct 1687 GTTTTGTCCACCGTAAATTGGATCGCATTCACAGCCGGCTTGGTGCGCAAGTAGTACATG 1746 Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || || |||| ||||||||||| |||||||||| |||||||||| || ||||| | Sbjct 1747 CCAGTTTTCAATCCCATCTTCCAACCGTAAAAATGGATCGACGTCAGCTTGCCATAGTTT 1806 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 ||| | | | || | |||||||| || |||||||||||||||||| ||||| || Sbjct 1807 GGCTCGGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCTCCCCGATCCGCT 1866 Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 ||||| || || | || || ||| || ||||| || || |||||||| | | || Sbjct 1867 GCCATTTTGATGCACGTTTTCACCGATATCTCCCAGACCGTTTTGTACAGGTCGCGTATT 1926 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTT--T 22400 || |||||| | || ||| | || | ||||| || ||| || ||||| | Sbjct 1927 TCCTGCGGTATAGCCTCTATCTTTTGAATCGACCCATTGTTG-----GACAGAATTTCGT 1981 Query 22401 TAATCGTATCG---TTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCA 22457 | || | ||| | |||||| || ||| || | ||| | | |||||| |||||| Sbjct 1982 TCTTCATGTCGAGATCCCACAAGCCCATGTTAGTTAGATCCTGCAGCAGATGGTGGTTCA 2041 Query 22458 CCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGA 22517 |||| || |||||||| |||| ||||| | | ||||| ||| |||||| |||| |||| Sbjct 2042 CCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATGTGTACGGCTCGA 2101 Query 22518 AAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTA 22577 | |||||||| || || || || || || |||||||| ||||||||||| |||||||| | Sbjct 2102 ACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCGGAGCCAACAGCA 2161 Query 22578 GCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGAT 22637 |||||| | | |||||||| | ||| || ||| | | | ||||| ||| ||| Sbjct 2162 ACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGCCCAGTTCCATAGA- 2220 Query 22638 CGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGC 22697 | || | | | |||| |||||| ||||| |||| | ||| || ||||||||| Sbjct 2221 --GTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCTTACCGGGCTGC 2278 Query 22698 CTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGC 22757 | ||||||||||||||||| |||| ||||| | |||||||| || |||| ||| | Sbjct 2279 CCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAGCTTCCAGCGCTC 2338 Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACG 22817 | || || || || ||||| || | | ||||| || || | |||||||||||| Sbjct 2339 CATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCTCGCTTTCGTACG 2398 Query 22818 GCATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876 | ||| ||||||| | |||||| || ||||| ||||| || || || ||||| |||| | Sbjct 2399 G-ATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCCGATGGGTCTG 2457 Query 22877 TTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTG 22936 | || || || || ||||| |||| ||| || | || || || || || Sbjct 2458 TGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTAGTTAACGTCAATGATTTTG 2517 Query 22937 TTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCC 22996 |||| || | ||||| ||||| | | |||| ||||| | Sbjct 2518 TTCAGATTGCGTGTCACTATTTTGGCCACTTCCTTCAGCTTAGCAAAATCGTA-----CG 2572 Query 22997 GATTGTAC-----AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCT 23051 |||| | || ||| |||| | || |||||||| |||||||| || || | | Sbjct 2573 TTTTGTCCTGCTTTACGAACATGTTCAGCGCAATCGAGGCTAGATTGCACACCGCTATTT 2632 Query 23052 CGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCA 23111 |||| ||||||| |||||| ||||| ||||| || || ||| |||||| || ||||| | Sbjct 2633 CGTCCTTGGACGAGTACTCCACAATCTCGGTGCACAGGTTGGAACACTTGATGGTGCCAA 2692 Query 23112 AATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCG 23171 || ||| ||||| || ||||| |||| ||||||||| ||||||||||| |||| Sbjct 2693 TGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACAGCATGTACGGTACACCCG 2752 Query 23172 TCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGT 23231 | || ||||||||||||||||| || ||| | ||| || | || |||| | Sbjct 2753 TTTCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTGCGCCTTCACCTGTCGAATAA 2812 Query 23232 ACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGG 23291 | | || || | ||||||| ||||| | || || || | || | | |||| Sbjct 2813 AGCGACCCTCCTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCACGAATCGG 2872 Query 23292 CCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTC 23351 ||| ||||| | | ||||||||| |||||||||||| || || || || Sbjct 2873 CCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATTTCGTTCGCCTCGACACGCT 2932 Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || |||||||||||||| || ||||| |||| || ||||| |||||||| |||| Sbjct 2933 TCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCCCGGGCTCGCACCTCTTCTT 2992 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 |||||||||| || || | ||| | ||| || || | || | |||||||||||||| | Sbjct 2993 TGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATCTCCGTGCCACGGCTCGAGAT 3052 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | || ||||| || || | || ||||| ||||| ||||| || || ||||| |||| Sbjct 3053 AGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCGACATACCGTGCCGTATTGT 3112 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCG--CCTACGCCCGCCACACT 23589 ||||||| | | ||||||||| || ||||| || ||| | || || | | Sbjct 3113 TGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCGTTCGTA--CCAGATATGTA 3170 Query 23590 CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATAT 23649 || || || || || | | ||| |||| | || || || ||| | ||||| || || Sbjct 3171 CGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGGCCAATACCACCGGCAGATTTGGAAAT 3230 Query 23650 CATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC---TTTGGTCGC 23706 | || || || || || || |||||||| |||||||| ||||| || ||||| Sbjct 3231 AAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATACTGTCATCGGACATGGTC-- 3288 Query 23707 GACCAAGAAACACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCG 23762 | || ||||| ||||||| || |||| |||| || |||| |||| |||| Sbjct 3289 -AGCAGAAAACAGGAAGACAGCTGGGGCCGCT----GCGTGGCCGCCGCAAACATGGTCG 3343 Query 23763 GGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAA 23822 | || || || ||||| | | |||| ||||||||||| ||||| || ||||| | Sbjct 3344 GTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGATCGCTGCATCGA 3403 Query 23823 TGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCG 23882 |||| || ||||| |||||||||||||||||||||| ||||| || || | |||||| Sbjct 3404 TGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGCTGTGGCCGCTCGACAA 3463 Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942 | || || || || | || ||| || |||| || ||||||||||| ||||||| | Sbjct 3464 TCTTACCCTTGATCTTCAGCAAATACGATCGTTCCAAGGTTTTAAATCCGAAATAGTTGT 3523 Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGA 24002 | ||| || ||||||| | || ||||| |||| |||| ||||| | || | Sbjct 3524 ACCCAAAATCGCGATCGTAAATGATCGCCGAGTTCAGCCGGTCGGCATTATCCATAATCA 3583 Query 24003 TGTTGTAATGAAAATTCGATATCATCGGCGTTTT 24036 ||||| ||||| | ||| ||||| |||| ||| Sbjct 3584 CTTTGTAGTGAAAGTCCGAAATCATAGGCGATTT 3617 >seq2119 Length=1501809 Score = 201 bits (222), Expect = 1e-46 Identities = 304/430 (71%), Gaps = 2/430 (0%) Strand=Plus/Minus Query 57879 CTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAA 57937 ||||| ||||| |||||||| |||| ||| | |||||||| || ||| || | || Sbjct 1235238 CTGTTTAACGCCATCGAAACGCTGCCGTGCG-TGAAGAAGAAGGCTGACTGGGCACTGAA 1235180 Query 57938 ATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGA 57997 ||||| ||| | ||||| || | ||| || | | ||||| |||||||| || Sbjct 1235179 CTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAACGGGTTGTGGCGTTTGCCGCCGTTGA 1235120 Query 57998 AGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGAT 58057 |||||| ||||| || ||||| || |||| || ||| ||||||| || |||||||| Sbjct 1235119 AGGTATCTTCTTCAGTGGAAGCTTCGCTTCAATCTTCTGGCTGAAGAAGCGTGGCCTGAT 1235060 Query 58058 GCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTT 58117 ||| || || || || |||||| |||| ||||||||||| || || || ||| || Sbjct 1235059 GCCTGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTACACTGTGACTT 1235000 Query 58118 TGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACAT 58177 ||| || || |||| | | | || | || ||| || ||| ||| | ||| || Sbjct 1234999 TGCCTGTCTGATGTTCAAGTATCTGGTTCAGAAGCCGTCGAAGGAGCGCGTGACGGAGAT 1234940 Query 58178 TATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCAT 58237 |||| ||| || |||| |||||| | |||||| | || | || || || || | ||| Sbjct 1234939 TATCCGCGATGCTGTCGTGATCGAGCAGGAGTTTCTGACGAAGGCACTGCCCGTTGACAT 1234880 Query 58238 GCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTT 58297 |||||| |||||| |||| ||||||| ||||||| |||||||| || || | | | Sbjct 1234879 GCTCGGCATGAACTGTGATCTGATGTCGCAGTACATCGAGTTTGTGGCGGATCGTTTGCT 1234820 Query 58298 GCTCGAACTG 58307 |||||| ||| Sbjct 1234819 GCTCGAGCTG 1234810 >seq147 Length=443619 Score = 127 bits (140), Expect = 2e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||||||||| |||||||| || ||||| || ||||| || ||||| |||| || || || Sbjct 111695 AAACATGCAGATTTTCGTGAAAACTCTTACTGGCAAGACCATCACACTCGAGGTCGAGCC 111754 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| |||| | || || | || ||||||||||||| | || || || Sbjct 111755 TTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGA 111814 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||| || || ||||| ||||| ||| |||| || | ||| | ||||| Sbjct 111815 TCAGCAGCGACTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCTGATTA 111874 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || |||||||| ||||||||||| || |||| | || |||| Sbjct 111875 CAACATCCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTTCGTGGAGGTA 111927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445751505830160