Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1391 345 5e-90 seq2119 131 2e-25 >seq1391 Length=279726 Score = 345 bits (382), Expect = 5e-90 Identities = 1194/1850 (65%), Gaps = 22/1850 (1%) Strand=Plus/Plus Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126 || || || || || | |||||||| || ||||| | || | |||| ||||||||| Sbjct 1720 GCCGGCTTGGTGCGCAAGTAGTACATGCCAGTTTTCAATCCCATCTTCCAACCGTAAAAA 1779 Query 62127 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62186 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 1780 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCGGCGACGTGAATGTTGAACGATTGCGAC 1839 Query 62187 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCC 62246 |||||||| || ||||||| || || |||||||| ||| ||| || | || ||| Sbjct 1840 TGATCGATAAACGCTCCCCGATCCGCTGCCATTTTGATGCACGTTTTCACCGATATCTCC 1899 Query 62247 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATGGAT 62303 || | ||||| || | |||| || | || | | | | | ||| | ||||| || Sbjct 1900 CAGACCGTTTTGTACAGGTCGCGTATTTCCTGCGGTATAGCCTCTATCTTTTGAATCGAC 1959 Query 62304 CCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 62363 ||| | || ||| ||||| || || || ||| || | | |||| | Sbjct 1960 CCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAAGCCCATGTTAGTTAGA 2019 Query 62364 ACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAA 62423 | || ||||| |||| || || ||||| || || |||| || | || ||||| Sbjct 2020 TCCTGCAGCAGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAA 2079 Query 62424 ATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 62483 | || || ||||| || | ||| |||||||| || | ||||| ||||| || || Sbjct 2080 ACGTTCGATGTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCC 2139 Query 62484 GTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTT 62543 |||||||| || |||| || || || | | ||||| | || || || || Sbjct 2140 GTCGGCATCGGAGCCAACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTC 2199 Query 62544 AGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATA 62603 | | | |||| ||||| ||| || || | || || || || Sbjct 2200 AACTCTGCCCAGTTCCATAGAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATG 2259 Query 62604 CCGTTACTGGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTT 62662 || || || | | | ||| | || || || || ||||| || | || | | Sbjct 2260 CCTTTGCTTACCGGGCTGCCCT-CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTC 2318 Query 62663 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTG 62722 || || || || | || || || || |||||||| || |||| | || || | ||| Sbjct 2319 GCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTG 2378 Query 62723 TGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAAC 62782 || ||| ||| || | ||||| | | || ||||| || || | || || || Sbjct 2379 AGCCTCCTCGCTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCAC 2438 Query 62783 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 62842 ||| || ||||| ||||| || | | | || ||| | ||| || || | ||| || || Sbjct 2439 ACCGATGCCGATGGGTCTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTA 2498 Query 62843 ATTAATATCTATAATTTTATTGAGATTTC-TGACAATTACTTTGACCACATCCTTCAGTT 62901 |||| || || ||||| || ||||| | || || | | |||| |||| |||||||| | Sbjct 2499 GTTAACGTCAATGATTTTGTTCAGATTGCGTGTCACT-ATTTTGGCCACTTCCTTCAGCT 2557 Query 62902 TGAGAAAATCAAA----TCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGA 62957 | |||||| | | | || || |||| |||||||||| |||| || || ||| Sbjct 2558 TAGCAAAATCGTACGTTTTGTCCTGCT-TTACGAACATGTTCAGCGCAATCGAGGCTAGA 2616 Query 62958 TTACACACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTAC 63015 || ||||| |||| || | | | | || || | | ||||| ||||| || || Sbjct 2617 TTGCACACCGCTATTTCGTCCTTGGA--CGAGTACTCCACAATCTCGGTGCACAGGTTGG 2674 Query 63016 TACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 63075 ||||||||| || || | || || ||||| ||||| |||||||||||||| || | Sbjct 2675 AACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACA 2734 Query 63076 GAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 63135 | ||| | || ||| ||||||| ||| || || || || || ||| | | | | | Sbjct 2735 GCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTGCG 2794 Query 63136 CCTTTAT-TATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAAC 63194 |||| | | | || | || | || | ||||| || |||| |||||| Sbjct 2795 CCTTCACCTGTCGAATAAAGCGACCCTCCT-TCTCGTACCCCGTGTACAGCTTCTCGAAC 2853 Query 63195 TCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCT 63254 || || ||||| || | |||||| ||||| || | ||||||||||| |||| | Sbjct 2854 TCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATT 2913 Query 63255 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 63314 ||| ||| || || ||||| || ||||| || ||||| || || ||| | || Sbjct 2914 TCGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCC 2973 Query 63315 CTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 63374 | | || || || || || || || || ||||||||||| ||| | | ||||| Sbjct 2974 CGGGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATCT 3033 Query 63375 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 63434 |||||||| || | || || || | |||||||||||||||| || ||||| || Sbjct 3034 CCGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCG 3093 Query 63435 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCA 63494 | || | || || || || || || | |||||| || | | |||||||| || || Sbjct 3094 ACATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCG 3153 Query 63495 TTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTC 63552 || ||||| || || || ||| | || || || | | | || | | || || | Sbjct 3154 TTCGTACCAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCA--GGCCAATAC 3211 Query 63553 CCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGC 63612 | || || ||| || || | || || | || | ||| || ||||| || || || | Sbjct 3212 CACCGGCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATAC 3271 Query 63613 TATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCAT 63672 | |||||| |||| | || ||||||||| ||||| ||| | || || |||| Sbjct 3272 TGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCG 3331 Query 63673 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAA 63732 ||| | ||| || ||||| || || || | || || || ||||||||||| || | Sbjct 3332 CAAACATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGA 3391 Query 63733 TAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 63792 | |||| || || || || || || | ||||| ||||| | ||||||||| | Sbjct 3392 TCGCTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGCTGTG 3451 Query 63793 GTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAAC 63852 | | || ||||| || || || |||| ||| || ||| |||||| |||||||| | Sbjct 3452 GCCGCTCGACAATCTTACCCTTGATCTTCAGCAAATACGATCGTTCCAAGGTTTTAAATC 3511 Query 63853 CAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 | ||||||||||| ||| || || |||||||| || |||| || ||| Sbjct 3512 CGAAATAGTTGTACCCAAAATCGCGATCGTAAATGATCGCCGAGTTCAGC 3561 >seq2119 Length=1501809 Score = 131 bits (144), Expect = 2e-25 Identities = 186/259 (72%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 33570 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTA 33629 || ||||||| ||| || || || ||||| || || ||||| | ||| | ||||| Sbjct 1234982 TTGAACATCAGACAGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 1235041 Query 33630 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33689 || || |||||||| ||||| ||||||||||| || ||||| || || |||||||| | Sbjct 1235042 GAGAAGGTGAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTT 1235101 Query 33690 CCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33749 || |||||||| ||||| || || ||||| || | || | || ||| | ||| Sbjct 1235102 CCACTGAAGAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGC- 1235160 Query 33750 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33804 || || || ||||| || | ||||| || |||||||| || || || |||| || Sbjct 1235161 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 1235219 Query 33805 TTTCTATGGCATTAAAGAG 33823 |||| ||||| ||||| || Sbjct 1235220 TTTCGATGGCGTTAAACAG 1235238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629796556219440