Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1391 109 5e-19 >seq1391 Length=279726 Score = 109 bits (120), Expect = 5e-19 Identities = 351/541 (65%), Gaps = 3/541 (1%) Strand=Plus/Plus Query 38095 TTTCTTAAGCTT-AGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACAT 38153 ||||||||| | ||||| ||||||||||| ||||||| || || | ||| || | | Sbjct 3003 TTTCTTAAGATCGAGAAACTCGAATATATCTCCGTGCCACGGCTCGAGATAGATAGCGAA 3062 Query 38154 TGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCT 38213 ||||| || | ||| | || ||||| | | ||| | | || || || || | | Sbjct 3063 CGCTCCAGGCCGTTTGTTGCCACCCTGGTCGACATACCGTGCCGTATTGTTGTACACGCG 3122 Query 38214 TAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGC 38273 ||||| || || | || || || | ||||| |||| ||||| || || ||||| || Sbjct 3123 CAACATCGGCACCAGTCCGTTTGAAATTCCGTTCGTACCAGATATGTACGTTCCCTTCGC 3182 Query 38274 TCGTATATTACTTATCG-ACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATT 38332 || || | | || || || || ||||| ||| ||| || || | || || | Sbjct 3183 GCGGAT-GCAGTGCACGTTCAGGCCAATACCACCGGCAGATTTGGAAATAAGGGCACACT 3241 Query 38333 GTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAAC 38392 | || | |||||| | ||||| || ||||||||||| || | || | |||||| Sbjct 3242 GCTTGAGCGTATCGTAGATACCCTCGATACTGTCATCGGACATGGTCAGCAGAAAACAGG 3301 Query 38393 TAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACC 38452 ||||| || ||| | || | || ||| | || || || ||||| |||| Sbjct 3302 AAGACAGCTGGGGCCGCTGCGTGGCCGCCGCAAACATGGTCGGTGAAGCATGGGTGAAGT 3361 Query 38453 ATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATAC 38512 | || |||| ||| || ||||| || | |||| || || ||||||| |||| Sbjct 3362 AGCGCTCGGACAGCAGATTGTACGTTTCGATCGCTGCATCGATGTCTTCGCCGTGGATAC 3421 Query 38513 CTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAA 38572 | | | || | ||| ||||| || ||||| | || | || ||| || || | Sbjct 3422 CGATGGCGACGCGCATCAGCATGTGCTGTGGCCGCTCGACAATCTTACCCTTGATCTTCA 3481 Query 38573 GTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTATCGT 38632 | | ||||||| ||| || ||||| | ||| ||||| | || | |||| | ||||| Sbjct 3482 GCAAATACGATCGTTCCAAGGTTTTAAATCCGAAATAGTTGTACCCAAAATCGCGATCGT 3541 Query 38633 A 38633 | Sbjct 3542 A 3542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468509145415120