Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1391 340 2e-88 seq2119 113 6e-20 >seq1391 Length=279726 Score = 340 bits (376), Expect = 2e-88 Identities = 1190/1848 (64%), Gaps = 20/1848 (1%) Strand=Plus/Plus Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919 || || || || || | |||||||| || ||||| | || | |||| ||||||||| Sbjct 1720 GCCGGCTTGGTGCGCAAGTAGTACATGCCAGTTTTCAATCCCATCTTCCAACCGTAAAAA 1779 Query 64920 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 64979 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 1780 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCGGCGACGTGAATGTTGAACGATTGCGAC 1839 Query 64980 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 65039 |||||||| || ||||||| || || |||||||| ||| ||| || | || ||| Sbjct 1840 TGATCGATAAACGCTCCCCGATCCGCTGCCATTTTGATGCACGTTTTCACCGATATCTCC 1899 Query 65040 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATGGAT 65096 || | ||||| || | |||| || | || | | | | | ||| | ||||| || Sbjct 1900 CAGACCGTTTTGTACAGGTCGCGTATTTCCTGCGGTATAGCCTCTATCTTTTGAATCGAC 1959 Query 65097 CCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 65156 ||| | | || ||| ||||| || || || ||| || | | |||| | Sbjct 1960 CCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAAGCCCATGTTAGTTAGA 2019 Query 65157 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 65216 | || ||||| | || || || || || || || |||| || | || ||||| Sbjct 2020 TCCTGCAGCAGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAA 2079 Query 65217 ATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 65276 | || || ||||| || | || |||||||| || | ||||| ||||| || || Sbjct 2080 ACGTTCGATGTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCC 2139 Query 65277 GTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTT 65336 |||||||| || |||| || || || | | ||||| | || || || || Sbjct 2140 GTCGGCATCGGAGCCAACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTC 2199 Query 65337 AGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATA 65396 | | |||| ||||| ||| || || | || || || Sbjct 2200 AACTCTGCCCAGTTCCATAGAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATG 2259 Query 65397 CCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 65455 || || || | | | ||| | || || ||||| ||||| || | || | || Sbjct 2260 CCTTTGCTTACCGGGCTGCCCT-CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTC 2318 Query 65456 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 65515 || || || || | || || || || ||||||||||| |||| | || || | ||| Sbjct 2319 GCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTG 2378 Query 65516 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 65575 || ||| ||| || | ||||| | | || ||||| || || | || || || Sbjct 2379 AGCCTCCTCGCTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCAC 2438 Query 65576 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 65635 ||| || ||||| ||||| || | | | || ||| | ||| || || | ||| || || Sbjct 2439 ACCGATGCCGATGGGTCTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTA 2498 Query 65636 ATTAATATCTATAATTTTATTGAGATTTC-TGACAATTACTTTGACCACATCCTTCAGTT 65694 |||| || || ||||| || ||||| | || || | | |||| |||| |||||||| | Sbjct 2499 GTTAACGTCAATGATTTTGTTCAGATTGCGTGTCACT-ATTTTGGCCACTTCCTTCAGCT 2557 Query 65695 TGAGAAAATCAAA---TCGCTCATCTATTACAAACATGTTCAATGCAACAGATGCCAGAT 65751 | |||||| | | || | |||| |||||||||| |||| || || |||| Sbjct 2558 TAGCAAAATCGTACGTTTTGTCCTGCTTTACGAACATGTTCAGCGCAATCGAGGCTAGAT 2617 Query 65752 TACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACT 65809 | || || |||| || | | | | || || | | ||||| ||||| || || Sbjct 2618 TGCACACCGCTATTTCGTCCTTGGA--CGAGTACTCCACAATCTCGGTGCACAGGTTGGA 2675 Query 65810 ACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 65869 |||||||||||| || | || || ||||| ||||| |||||||||||||| || || Sbjct 2676 ACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACAG 2735 Query 65870 AATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC 65929 ||| | || ||| ||||||| ||| || || || || || ||| | | | | || Sbjct 2736 CATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTGCGC 2795 Query 65930 CTTTAT-TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACT 65988 ||| | | | || | | | || | ||||| || |||| ||||||| Sbjct 2796 CTTCACCTGTCGAATAAAGCGACCCTCCT-TCTCGTACCCCGTGTACAGCTTCTCGAACT 2854 Query 65989 CGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTC 66048 | || ||||| || | ||||||| ||||| || | ||||||||||| |||| | Sbjct 2855 CTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATTT 2914 Query 66049 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTC 66108 ||| ||| || || ||||| || ||||| || ||||| || || ||| | || | Sbjct 2915 CGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCCC 2974 Query 66109 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAT 66168 || || || || || || || || || ||||||||||| ||| | | ||||| Sbjct 2975 GGGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATCTC 3034 Query 66169 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 66228 |||||||| || | || || || | |||||||||||||||| || ||||| || | Sbjct 3035 CGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCGA 3094 Query 66229 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 66288 || | || || || || || || | |||||| || | | || || || | || | Sbjct 3095 CATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCGT 3154 Query 66289 TGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCC 66346 | || || || || || |||| | || || || | | | || | | || || || Sbjct 3155 TCGTACCAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCA--GGCCAATACC 3212 Query 66347 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 66406 || || ||| || || | || || | || | |||||| ||||| ||||| ||||| Sbjct 3213 ACCGGCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATACT 3272 Query 66407 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 66466 ||||| |||| | || ||||||||| ||||| ||| | || || |||| Sbjct 3273 GTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCGC 3332 Query 66467 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 66526 ||| | ||| || ||||| || || || | || || || ||||||||||| || || Sbjct 3333 AAACATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGAT 3392 Query 66527 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 66586 |||| || || || || || || | ||||| ||||| | ||||||||| || Sbjct 3393 CGCTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGCTGTGG 3452 Query 66587 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 66646 | || || ||||| || || |||| ||| || ||| |||||| |||||||| || Sbjct 3453 CCGCTCGACAATCTTACCCTTGATCTTCAGCAAATACGATCGTTCCAAGGTTTTAAATCC 3512 Query 66647 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 ||||||||||| ||| || || |||||||| || ||||||| || Sbjct 3513 GAAATAGTTGTACCCAAAATCGCGATCGTAAATGATCGCCGAGTTCAG 3560 >seq2119 Length=1501809 Score = 113 bits (124), Expect = 6e-20 Identities = 182/259 (70%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 36146 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 36205 || ||||||| ||| || || || |||||||| || ||||| | ||| | ||||| Sbjct 1234982 TTGAACATCAGACAGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 1235041 Query 36206 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 36265 || || |||||||| ||||| ||||||||||| || ||||| || || || || || | Sbjct 1235042 GAGAAGGTGAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTT 1235101 Query 36266 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 36325 ||| ||||| || ||||| || || ||||| || | || | || ||| | ||| Sbjct 1235102 CCACTGAAGAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGC- 1235160 Query 36326 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 36380 || || || ||||| || | ||||| || |||||||| || || || |||| | Sbjct 1235161 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 1235219 Query 36381 TCTCTATAGCATTAAAGAG 36399 | || || || ||||| || Sbjct 1235220 TTTCGATGGCGTTAAACAG 1235238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658150808801320