Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1112 102 6e-17 seq2119 93.3 3e-14 >seq1112 Length=2574882 Score = 102 bits (112), Expect = 6e-17 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGG 33623 || ||||| |||| |||||||||||||||||| ||||| |||||||| |||||||| Sbjct 1512186 CGAATACCCCAGATTGGCGACAAGTTTGCATCGCGCCACGG-ACAGAAGGGTACGTGCGG 1512244 Query 33624 CATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGT 33683 || |||| |||| ||| |||||||| ||| ||| ||| | |||||| | | Sbjct 1512245 AATACAGTACCGCCAGGAGGATATGCCGTTTACGTGCGAGGGCATCACGCCGGACATTAT 1512304 Query 33684 CATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 |||||||||||| || |||| || || ||||| Sbjct 1512305 CATCAACCCGCACGCTATCCCGTCCCGTATGAC 1512337 >seq2119 Length=1501809 Score = 93.3 bits (102), Expect = 3e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| ||||| || |||||||| || | || ||| || || | || ||||||| Sbjct 1235138 TGGCGTTTGCCGCCGTTGAAGGTATCTTCTTCAGTGGAAGCTTCGCTTCAATCTTCTGGC 1235079 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||| ||| || ||||| || | | || || |||||| ||||| || |||| Sbjct 1235078 TGAAGAAGCGTGGCCTGATGCCTGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACG 1235019 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 |||| ||||||||||||||||| ||| || |||| Sbjct 1235018 AAGGGCTACACTGTGACTTTGCCTGTCTGATGTT 1234985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356221994911219