Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1391 358 1e-93 seq2119 140 5e-28 >seq1391 Length=279726 Score = 358 bits (396), Expect = 1e-93 Identities = 1203/1853 (65%), Gaps = 30/1853 (2%) Strand=Plus/Plus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || || || || || | |||||||| || ||||| | || | |||| ||||| ||| Sbjct 1720 GCCGGCTTGGTGCGCAAGTAGTACATGCCAGTTTTCAATCCCATCTTCCAACCGTAAAAA 1779 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 1780 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCGGCGACGTGAATGTTGAACGATTGCGAC 1839 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 |||||||| || ||||||| || || |||||||| ||| ||| || | || ||| Sbjct 1840 TGATCGATAAACGCTCCCCGATCCGCTGCCATTTTGATGCACGTTTTCACCGATATCTCC 1899 Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATGGAT 78975 || | ||||| || | |||| || | || | | | | | ||| | ||||| || Sbjct 1900 CAGACCGTTTTGTACAGGTCGCGTATTTCCTGCGGTATAGCCTCTATCTTTTGAATCGAC 1959 Query 78976 CCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAA 79035 ||| | | || ||| ||||| || || || ||| || | | |||| | Sbjct 1960 CCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAAGCCCATGTTAGTTAGA 2019 Query 79036 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 79095 | || ||||| | || || || || || || || |||| || | || ||||| Sbjct 2020 TCCTGCAGCAGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAA 2079 Query 79096 ATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCC 79155 | || || || || || | |||||||||||| || | ||||| ||||| || ||| Sbjct 2080 ACGTTCGATGTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCC 2139 Query 79156 GTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTT 79213 || ||||| || |||| || || || | | ||||| | | | || || || | Sbjct 2140 GTCGGCATCGGAGCCAACAGCAACGAGTTGCGGATACCGT--GCTTCGCAATCTTTTCCT 2197 Query 79214 TTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAA 79273 | | | |||| | ||| ||| | || | ||||| | || || || || | Sbjct 2198 TCAACTCTGCCCAGTTCCATAGAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGA 2257 Query 79274 TACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAAT 79332 | || || || | || ||| ||| ||||| || ||||| || |||| || Sbjct 2258 TGCCTTTGCTTACCGGGCTGCCCTC-GTACGTTTCGTACGGTCCATCACGAGCGGCCAAC 2316 Query 79333 TCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCT 79392 || || || || || | ||||| || || ||||||||||| |||| | || || | | Sbjct 2317 TCGCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTT 2376 Query 79393 TGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGA 79452 || || || ||| || | ||||| | | || ||||| || || | || || Sbjct 2377 TGAGCCTCCTCGCTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGC 2436 Query 79453 ACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAA 79512 ||||| || ||||| ||||| || | | | || || | ||| || || | ||| || Sbjct 2437 ACACCGATGCCGATGGGTCTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAG 2496 Query 79513 TAATTAATATCTATAATTTTATTGAGATTCC-TGACTATTACTTTGACCACATCCTTTAG 79571 || |||| || || ||||| || ||||| | || | | || |||| |||| ||||| || Sbjct 2497 TAGTTAACGTCAATGATTTTGTTCAGATTGCGTGTC-ACTATTTTGGCCACTTCCTTCAG 2555 Query 79572 TTTGAGAAAATCAAA----TCGTCCATCTATTACAAACATGTTCAACGCGACAGATGCCA 79627 || |||||| | | |||| || |||| |||||||||| ||| | || || | Sbjct 2556 CTTAGCAAAATCGTACGTTTTGTCCTGCT-TTACGAACATGTTCAGCGCAATCGAGGCTA 2614 Query 79628 GATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTT 79685 |||| || || |||| || | | | | || || | | || || ||||| ||||| Sbjct 2615 GATTGCACACCGCTATTTCGTCCTTGGA--CGAGTACTCCACAATCTCGGTGCACAGGTT 2672 Query 79686 ACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 79745 |||||| ||||| || | || || ||||| ||||| |||||||||||||| || Sbjct 2673 GGAACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTA 2732 Query 79746 AAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCG 79805 || ||| |||| ||| ||||||| ||| || || || || || ||| | | | | Sbjct 2733 CAGCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTG 2792 Query 79806 AGCCTTTAT-TATAGACTTGTATCTCTTTTCTCTTTCGTATT--GTGTATATAATCGTTC 79862 ||||| | | | || | | | || | ||||| ||||| | || || Sbjct 2793 CGCCTTCACCTGTCGAATAAAGCGACCCTCCT-TCTCGTACCCCGTGTACAGCTTC--TC 2849 Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922 |||||| || ||||| |||| | ||||| ||||| |||| |||||||||| ||| Sbjct 2850 GAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCA 2909 Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982 | | | | ||| || || ||||| || ||||| || ||||| || || ||| | Sbjct 2910 CATTTCGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACAT 2969 Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042 || | || || ||| || || || || || || ||||||||||| ||| | | || Sbjct 2970 GTCCCGGGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATAT 3029 Query 80043 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTG 80102 ||| |||||||| || | || || || | |||| || |||||||| || ||||| Sbjct 3030 ATCTCCGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTG 3089 Query 80103 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 80162 || | || | || || || || || || | |||||| || | | || || || | Sbjct 3090 GTCGACATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAAT 3149 Query 80163 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCT 80220 || || || || || || || |||| | || || || | | | || | | || Sbjct 3150 TCCGTTCGTACCAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCA--GGCCA 3207 Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 80280 || || || || ||| || || | || || | || | |||||| ||||| ||||| Sbjct 3208 ATACCACCGGCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCG 3267 Query 80281 ATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 80340 || || ||||| |||| | || ||||||||| ||||| ||| | || || || Sbjct 3268 ATACTGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCC 3327 Query 80341 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 80400 || ||| | ||| || ||||| || || || | || ||||| ||||||||||| Sbjct 3328 GCCGCAAACATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTT 3387 Query 80401 TCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGC 80460 || || |||| || || || || || || | ||||| ||||| | ||||||| Sbjct 3388 TCGATCGCTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGC 3447 Query 80461 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTA 80520 || || | || || ||||| || || |||| ||| || ||| |||||| |||||| Sbjct 3448 TGTGGCCGCTCGACAATCTTACCCTTGATCTTCAGCAAATACGATCGTTCCAAGGTTTTA 3507 Query 80521 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 || || ||||||||||| ||| || || |||||||| || ||||||| || Sbjct 3508 AATCCGAAATAGTTGTACCCAAAATCGCGATCGTAAATGATCGCCGAGTTCAG 3560 >seq2119 Length=1501809 Score = 140 bits (154), Expect = 5e-28 Identities = 188/259 (73%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || ||||||| ||| || || || ||||| || || ||||| | ||| || ||||| Sbjct 1234982 TTGAACATCAGACAGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 1235041 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || || |||||||| ||||| ||||||||||| || ||||| || || || || || Sbjct 1235042 GAGAAGGTGAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTT 1235101 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127 ||| |||||||| ||||| || |||||||| || |||| | || ||| | |||| Sbjct 1235102 CCACTGAAGAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGC- 1235160 Query 50128 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182 || || || ||||| || | ||||| || |||||||| || || || |||| || Sbjct 1235161 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 1235219 Query 50183 TTTCTATGGCATTAAAGAG 50201 |||| ||||| ||||| || Sbjct 1235220 TTTCGATGGCGTTAAACAG 1235238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718244800843720