Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1391 313 3e-80 seq2119 122 1e-22 >seq1391 Length=279726 Score = 313 bits (346), Expect = 3e-80 Identities = 1179/1835 (64%), Gaps = 30/1835 (2%) Strand=Plus/Plus Query 70840 TAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG 70899 ||||||||||| ||||| | || | |||| ||||||||||| || ||| || ||| Sbjct 1738 TAGTACATGCCAGTTTTCAATCCCATCTTCCAACCGTAAAAATGGATCGACGTCAGCTTG 1797 Query 70900 GAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCC 70959 |||| | || ||||| | |||||| || | ||| || |||||||| || |||||| Sbjct 1798 CCATAGTTTGGCTCGGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCTCCC 1857 Query 70960 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC- 71018 | || || |||||||| ||| ||| || | || ||||| | ||||| || | Sbjct 1858 CGATCCGCTGCCATTTTGATGCACGTTTTCACCGATATCTCCCAGACCGTTTTGTACAGG 1917 Query 71019 TCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATGGATCCACCATCTGCAATAATC 71076 |||| || | || | | | | | ||| | ||||| || ||| | | | ||| Sbjct 1918 TCGCGTATTTCCTGCGGTATAGCCTCTATCTTTTGAATCGACCCATTGTTGGACAGAATT 1977 Query 71077 CTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGA 71136 || || || || || ||| || | | |||| | | || ||||| | Sbjct 1978 TCGTTCTTCATGTCGAGATCCCACAAGCCCATGTTAGTTAGATCCTGCAGCAGATGGTGG 2037 Query 71137 TTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGT 71196 || || || || || || || |||| || | | |||||| || || ||||| Sbjct 2038 TTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATGTGTACGGC 2097 Query 71197 TCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 71256 || | || |||||||| || | ||||| ||||| || || |||||||| || |||| | Sbjct 2098 TCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCGGAGCCAAC 2157 Query 71257 AATAGACTATTT-CTAAGACCATGTGATCGGATT-TTATCTTTTAGAGATTCCCAATTCC 71314 | | || | || | | ||| || ||| | | || || || | | |||| |||| Sbjct 2158 AGCA-ACGAGTTGCGGATACCGTGCT-TCGCAATCTTTTCCTTCAACTCTGCCCAGTTCC 2215 Query 71315 AAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACT-AGCGTAT 71373 | ||| || || | ||||| || || | || Sbjct 2216 ATAGAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCTTACCGGGC 2275 Query 71374 GATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAAT 71433 ||| | || || ||||| ||||| || |||| | || || || || || | Sbjct 2276 TGCCCT-CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAGCTTCCAGC 2334 Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCA 71493 |||||||| || ||||||||||| |||| | || || | ||| || ||| ||| || Sbjct 2335 GCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCTCGCTTTCG 2394 Query 71494 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGT 71553 | ||||| | | || ||||| || || | || || || || || ||||| ||| Sbjct 2395 TACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCCGATGGGT 2454 Query 71554 CTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 71613 ||||| | | | || || | ||| || || | ||| || || |||| || || ||| Sbjct 2455 CTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTAGTTAACGTCAATGATT 2514 Query 71614 TTATTGAGATTTC-TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA--- 71669 || || ||||| | || | | || |||| |||| ||||| || || |||||| | Sbjct 2515 TTGTTCAGATTGCGTGTC-ACTATTTTGGCCACTTCCTTCAGCTTAGCAAAATCGTACGT 2573 Query 71670 TCTCCCATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTC 71729 | | | | |||| |||| ||||| |||| || || ||||| || || |||| || Sbjct 2574 TTTGTCCTGCTTTACGAACATGTTCAGCGCAATCGAGGCTAGATTGCACACCGCTATTTC 2633 Query 71730 ATTAGCATCGGCA--TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCT 71787 | | | | | || | | ||| || ||||| || || |||||||||||| || Sbjct 2634 GTC--CTTGGACGAGTACTCCACAATCTCGGTGCACAGGTTGGAACACTTGATGGTGCCA 2691 Query 71788 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCA 71847 | || || ||||| ||||| |||||||||||||| || || || |||| ||| Sbjct 2692 ATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACAGCATGTACGGTACACCC 2751 Query 71848 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTG 71907 ||||||| ||| || || || || || ||| | | | | ||||| | || Sbjct 2752 GTTTCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTGCGCCTTCACCTG--TCGAA 2809 Query 71908 TATCTCTTTTCTCTTTC--GTATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAGC 71963 || | ||| ||| ||| ||||| | || |||||||| || ||||| | Sbjct 2810 TAAAGCGACCCTCCTTCTCGTACCCCGTGTACAGCTTC--TCGAACTCTTCGCCCCACGA 2867 Query 71964 ATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTAC 72023 || | | ||||| ||||| || | ||||||||||| |||| | | | | | || Sbjct 2868 ATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATTTCGTTCGCCTCGAC 2927 Query 72024 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTC 72083 || ||||| || ||||| || ||||| || || ||| | || | || || ||| Sbjct 2928 ACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCCCGGGCTCGCACCTC 2987 Query 72084 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 72143 || || || || || || ||||||||||| ||| | | ||||| |||||||| || Sbjct 2988 TTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATCTCCGTGCCACGGCTC 3047 Query 72144 CAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 72203 | || || || | |||| ||||||||||| || ||||| || | || | || || Sbjct 3048 GAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCGACATACCGTGCCGT 3107 Query 72204 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGAT 72263 || || || || | |||||| || | | || || || || || || || || || Sbjct 3108 ATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCGTTCGTACCAGATAT 3167 Query 72264 ATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321 || |||| | || || || | ||| || | | || || || || || ||| Sbjct 3168 GTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCA--GGCCAATACCACCGGCAGATTTG 3225 Query 72322 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 72381 || || | || || | || | |||||| ||||| ||||| ||||| ||||| |||| Sbjct 3226 GAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATACTGTCATCGGACATG 3285 Query 72382 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 72441 | || ||||||||| ||||| ||| | || || |||| ||| | ||| || Sbjct 3286 GTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCGCAAACATGGTCGGT 3345 Query 72442 GAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATA 72501 ||||| || || || | || ||||| ||||||||||| || || |||| || || Sbjct 3346 GAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGATCGCTGCATCGATG 3405 Query 72502 TCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATC 72561 || || || || | ||||| ||||| | ||| ||||| || | || || ||| Sbjct 3406 TCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGCTGTGGCCGCTCGACAATC 3465 Query 72562 TTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 72621 || || || |||| ||| || ||| |||||| |||||||| || ||||||||||| Sbjct 3466 TTACCCTTGATCTTCAGCAAATACGATCGTTCCAAGGTTTTAAATCCGAAATAGTTGTAC 3525 Query 72622 GAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 ||| || || |||||||| || |||| || || Sbjct 3526 CCAAAATCGCGATCGTAAATGATCGCCGAGTTCAG 3560 >seq2119 Length=1501809 Score = 122 bits (134), Expect = 1e-22 Identities = 184/259 (71%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112 || ||||||| ||| || || || ||||| || || || || | ||| | ||||| Sbjct 1234982 TTGAACATCAGACAGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 1235041 Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172 || || |||||||| ||||| ||||||||||| || ||||| || || || || || | Sbjct 1235042 GAGAAGGTGAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTT 1235101 Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232 ||| |||||||| ||||| || || ||||| || | || | || ||| | ||| Sbjct 1235102 CCACTGAAGAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGC- 1235160 Query 42233 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 42287 || || || ||||| || | ||||| || |||||||| || || || |||| || Sbjct 1235161 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 1235219 Query 42288 TTTCTATGGCATTAAAGAG 42306 |||| ||||| ||||| || Sbjct 1235220 TTTCGATGGCGTTAAACAG 1235238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671116775561480