Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1391 96.9 4e-15 seq2119 87.8 2e-12 >seq1391 Length=279726 Score = 96.9 bits (106), Expect = 4e-15 Identities = 503/793 (63%), Gaps = 25/793 (3%) Strand=Plus/Plus Query 156143 ACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCCGGTTTTG 156202 || |||||||| || ||| | ||||| ||||| || ||||||||||| ||||| Sbjct 1696 ACCGTAAATTGGATCGCATTCACAGCCGGCTTGGTGCGCAAGTAGTACATGCCAGTTTTC 1755 Query 156203 AGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAGTAGGGTTTGCC 156262 | || |||||||||||| | || | ||||| || || | || ||| || | | | Sbjct 1756 AATCCCATCTTCCAACCGTAAAAATGGATCGACGTCAGCTT-GCCATAGTTTGGCTCGGC 1814 Query 156263 -ATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTGCCATTTC 156321 | || | |||||||||||| ||||||||||| ||||||| || |||||||||| Sbjct 1815 GACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCTCCCCGATCCGCTGCCATTT- 1873 Query 156322 AATCATATATTTTCCATTGTTCTCCCAAATTTCCCAGATTGTCATGTACAGCTTTTTTAG 156381 | || | || ||| || | || ||||||| || ||||||| | || Sbjct 1874 --TGATGCACGTT------TTCACCGATATCTCCCAGACCGTTTTGTACAGGTCGCGTAT 1925 Query 156382 ATTGTCGGGAAT----TTTGGCGATAGAAGCTATCGATCCTCTGTTTGCCATGATT--GT 156435 | | || || | | | | || ||||| || |||| | || ||| || Sbjct 1926 TTCCTGCGGTATAGCCTCTATCTTTTGA----ATCGACCCATTGTTGGACAGAATTTCGT 1981 Query 156436 TTTTCGCATACTATTTGTATAGAGATTTAATTTGATTAGATCATCGACCAAGTAGCGGTT 156495 | ||| | | | | | | | || ||||||| | | || | | |||| Sbjct 1982 TCTTCATGT-CGAGAT-CCCACAAGCCCATGTTAGTTAGATCCTGCAGCAGATGGTGGTT 2039 Query 156496 GACAACTTGAAATTCGCCCGACAAAACACGTCTCAAAAACAAATT-ACTGTGAAACGGTT 156554 || || || || |||||||||| || || || | | || |||| |||| | Sbjct 2040 CACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATGTG-TACGGCT 2098 Query 156555 CAAATGACTCGTTGTTGTTGAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCACAA 156614 | || || || || ||| ||| ||||| || |||| ||||||||||| |||| | Sbjct 2099 CGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCGGAGCCAACA 2158 Query 156615 GCAATGAATTACGTAATCCGTATTTTTGTATATTTATTTTCAACTGTGACCAGTCCCATA 156674 |||| || || || | |||| || || ||| ||||||| || ||||| ||||| Sbjct 2159 GCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGCCCAGTTCCATA 2218 Query 156675 ACGAAGTCGGTACCGTATTCCACAAATCGTATTGCAATATTCCTTCGCTCGCTTTGCTAC 156734 | || || || | ||||||| ||||| |||| || |||| ||| | ||| | Sbjct 2219 GAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCTTACCGGGCTGC 2278 Query 156735 CGGCAAACGTGCTATAAGGCTCACTAACAGATGCCAGTTCGTAACTGGCCTCGAGCGCAG 156794 | | |||| || || || | || |||| ||| | || || || ||||| Sbjct 2279 CCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAGCTTCCAGCGCTC 2338 Query 156795 CATGATACACAGTTTCAGCAATTTGTTTATTCAATAGAACGGCAGCATCGCTCACGTACG 156854 ||| || | ||||| || |||| |||| | || | ||||| |||||| Sbjct 2339 CATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCTCGCTTTCGTACG 2398 Query 156855 GTATGCGCAACATAACAAATGCATCGGCCAAACCTTGAATGCCAATGCCGATGGGACGAT 156914 | ||||| || | || |||||||||| || || | || ||||||||||| | | Sbjct 2399 GATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCCGATGGGTCTGT 2458 Query 156915 GGCGCATATTAGA 156927 ||||||| || || Sbjct 2459 GGCGCATGTTGGA 2471 >seq2119 Length=1501809 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 50348 CGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaa-CTTACT 50406 |||| ||| || |||| || |||||| |||| |||| | ||| || | ||| Sbjct 1235213 CGTGCGTGAAGAAGAAGGCTGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCCAACT 1235154 Query 50407 TTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTT 50466 ||||| ||||| | |||||||||||| ||||||||| | || || || ||||| Sbjct 1235153 TTGGC-GAACGGGTTGTGGCGTTTGCCGCCGTTGAAGGTATCTTCTTCAGTGGAAGCTTC 1235095 Query 50467 GCAGCCATATTTTACATTAA-AACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGA 50525 || | || || | | || || | | ||| | ||||| || ||||| || ||||| Sbjct 1235094 GCTTCAATCTTCTGGCTGAAGAAGCGT-GGCCTGATGCCTGGACTCACCTTCTCGAACGA 1235036 Query 50526 GTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTG 50571 | ||||||||||||||||||| | ||| |||||||| ||| || Sbjct 1235035 GCTGATTTCGCGCGACGAAGGGCTACACTGTGACTTTGCCTGTCTG 1234990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506997459381360