Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1669 131 4e-25 >seq1669 Length=235595 Score = 131 bits (144), Expect = 4e-25 Identities = 225/324 (69%), Gaps = 2/324 (1%) Strand=Plus/Minus Query 238563 CTCGAGAGAGCCGAAACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGGTAAGA 238622 || |||| ||| |||| || || || ||||| || || ||| | || ||||| | Sbjct 204931 CTGGAGACGGCCAAAACGCATGACGATCTGTGGAACTCGGCGCAGCTGCAGATGGTGAAG 204872 Query 238623 CTAGGCAAAATGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAATGGACT 238682 ||||| |||||| | ||| | || ||||||||||| ||||||||||| || ||||| Sbjct 204871 GAGGGCAAGATGCATGGCTTCCTGCGGATGTATTGGGCGAAAAAGATACTGGAGTGGACG 204812 Query 238683 AGATCTCCAAAGGAAGCTCTTAGATATAG-TATTTATCTGAACGATAAATACGAACTCGA 238741 | | | || ||||||| ||| || | | || ||||| |||||| || || || Sbjct 204811 AAAACGCCCGAGGAAGCGCTT-GAGACGGCGATCTATCTTAACGATCGGTATAGCCTGGA 204753 Query 238742 CGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCAATATGTGGATTACACGATAG 238801 || ||||| ||||| ||||| ||||| |||||||| || || | |||||| Sbjct 204752 TGGGCGCGATCCAAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGTATTCACGATCA 204693 Query 238802 GGCATGGTCTGAGAGACCTATATTTGGAAAAGTTAGATACATGAATTATGAAGGAACTAA 238861 || ||| ||| | || ||||| ||| || |||||||||| ||||||||| ||| Sbjct 204692 GGGTTGGAAGGAGCGCGAAATCTTTGGCAAAATTCGATACATGAACTATGAAGGATGTAA 204633 Query 238862 GAAAAAATTTGATGTAAATGCTTT 238885 | ||||| |||| || || || Sbjct 204632 GCGTAAATTCAATGTGAACGCGTT 204609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151358967123484