Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq2011 140 3e-28 >seq2011 Length=138812 Score = 140 bits (154), Expect = 3e-28 Identities = 208/293 (71%), Gaps = 4/293 (1%) Strand=Plus/Plus Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562 ||| || || ||||| || || || || | ||||||||| || | | | |||||| Sbjct 11385 GCCGGTAGATCCGAAACCTCCAGCTCCACGTTCCGTATCCGTAAGTGATGGTAGCTCTTC 11444 Query 5563 CACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622 | ||| ||| | || ||| || || | ||| || || ||||| || |||| || Sbjct 11445 TAGATCCGGGTAGGCTATTTTCTCACAAATAAACTGTGCGATGCGGTCTCCTTTCTTCAC 11504 Query 5623 CTCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCG 5680 |||||||| | | |||| |||||||||||| ||||| ||||| || |||||||| Sbjct 11505 TTCGAAATCCGTCT--CCGAGTGGTTGAACAGCACAACGCCGACGTTACCACGGTAGTCC 11562 Query 5681 GCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGA 5740 |||| | || || || || || ||||| |||| ||| || ||||| || || |||||| Sbjct 11563 TCGTCGACGACACCGGCACCGACATCGATAAAGTTCTTCACTGCCAGACCAGAACGGGGA 11622 Query 5741 GCCACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGTGAACAC 5793 || || ||||| ||||| || || || | ||||| ||| | ||| || | ||| Sbjct 11623 GCTACCCGGCCATAGCAGCCTTCCGGCACCTGTACCTGGATGTCGGTCATCAC 11675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430040390037176