Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq2340 102 1e-16 >seq2340 Length=99732 Score = 102 bits (112), Expect = 1e-16 Identities = 209/309 (68%), Gaps = 4/309 (1%) Strand=Plus/Plus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||| | | |||||| | |||||||||||||| ||||| | || || Sbjct 78803 ATTGGGATTTCGGAAGAATGGGCATTGGTGGACTAGATCGTGAATTCAATGCAATATTTC 78862 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 | || |||||||| || | |||| ||| | | || | || || || |||| Sbjct 78863 GGCGTGCATTTGCATCACGTGTCTTTCCACCAGAAGTTGTTGAACAGTTGGGATGCAAAC 78922 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 || |||| || ||| | | |||||||||||||| |||||||| | ||||| || Sbjct 78923 ATGTAAAGGGCATTCTGCTGTATGGACCTCCTGGTACTGGTAAAACCCTTATGGCACGGC 78982 Query 164573 GCATTGCT--CAAGCTTTTAAATCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630 |||| | || |||| ||| || || |||||||| |||||||| | | || Sbjct 78983 AAATTGGTACCATGCTTAACGCTCGTGAACC--AAAAATTGTAAATGGTCCACAGATTTT 79040 Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA 164690 | |||||||| ||||| |||||||| || ||| | | | ||| ||| || ||||| Sbjct 79041 AGATAAATATGTTGGTGAATCAGAAGCAAACGTTCGTCGGCTTTTTGCGGATGCGGAAGA 79100 Query 164691 AGAACAAAA 164699 ||| |||| Sbjct 79101 AGAGGAAAA 79109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595852090426800