Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq1920 102 1e-16 >seq1920 Length=889085 Score = 102 bits (112), Expect = 1e-16 Identities = 362/560 (65%), Gaps = 12/560 (2%) Strand=Plus/Minus Query 193647 GAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTAT 193706 ||||| |||||||| | || || || || || || |||| || || || || || Sbjct 343609 GAGATATATAATCTGGCCGCCCAGAGCCACGTCAAGATTTCGTTCGATCTGAGCGAATAC 343550 Query 193707 ACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGA 193766 || | | || ||||| | || || || | | || || || |||||| |||| Sbjct 343549 ACGGCCGAGGTGGATGCAGTCGGTACGCTACGGTTGCTCGATGCGATTCGTACCGTGGGG 343490 Query 193767 ATGGAGAAAGATGTT-CGCATCTATCAGGCATCTACCAGCGAACTGTATGGT--GGTGTT 193823 ||| ||||| | | ||| |||| ||||| || || |||||||| || |||| | Sbjct 343489 CAGGA-AAAGACGGTGCGCTTCTACCAGGCGTCCACGTCGGAACTGTACGGGAAGGTGGT 343431 Query 193824 CTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCA 193883 || | | || | |||| || || || |||| ||||| || || | | || Sbjct 343430 GGAGACGCCGCAGAACGAGAAG--ACCCCGTTCTATCCCCGCTCGCCGTACGCTTGTGCG 343373 Query 193884 AAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGT 193943 ||| |||| || || ||||| | | || |||||||| | || | | ||| | Sbjct 343372 AAGATGTACGGGTACTGGATTGTAATCAACTATCGTGAAGCGTACGATATGTTCGCCTGC 343313 Query 193944 TCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAG 194003 ||| || || ||||||||||| || || | | || |||| ||||| || || || Sbjct 343312 AATGGCATCCTGTTCAATCACGAGTCACCGCGCCGCGGGGAGAATTTTGTGACGCGCAAA 343253 Query 194004 ATTACACAAGGTT---TATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGT 194060 || || | ||| | | ||||| || | || ||| | ||| | || || Sbjct 343252 ATCACCC---GTTCGGTGGCAAAGATTTCGCTCGGTCAGCAGGAATATCTGGAGCTGGGC 343196 Query 194061 AATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTA 194120 ||||| | | ||| | || ||||| ||||| |||||||| ||||| ||||||||| | Sbjct 343195 AATCTCGACTCAAAGCGTGACTGGGGCCACGCGAAGGATTACGTTGAGGCGATGTGGCTG 343136 Query 194121 ATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAACAGTATTCTGTT 194180 ||| |||| ||||| || || |||| || ||||| || |||||| | | || || Sbjct 343135 ATGATGCAGCAGGAACGGCCGGAAGATTTCGTCATTGCCACGGGTGAAACGCACTCGGTG 343076 Query 194181 AGAGACTTTGTGAATGAAGC 194200 | || |||||| | |||| Sbjct 343075 CGGGAGTTTGTGGAGAAAGC 343056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807528217561880