Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1391 365 6e-96 seq2119 140 4e-28 >seq1391 Length=279726 Score = 365 bits (404), Expect = 6e-96 Identities = 1197/1849 (65%), Gaps = 22/1849 (1%) Strand=Plus/Plus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || || || || || | |||||||| || ||||| | || | |||| ||||||||| Sbjct 1720 GCCGGCTTGGTGCGCAAGTAGTACATGCCAGTTTTCAATCCCATCTTCCAACCGTAAAAA 1779 Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 1780 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCGGCGACGTGAATGTTGAACGATTGCGAC 1839 Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 62195 |||||||| || ||||||| || || |||||||| ||| ||| || | || ||| Sbjct 1840 TGATCGATAAACGCTCCCCGATCCGCTGCCATTTTGATGCACGTTTTCACCGATATCTCC 1899 Query 62196 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATGGAT 62252 || | ||||| || | |||| || | || | | | | | ||| | ||||| || Sbjct 1900 CAGACCGTTTTGTACAGGTCGCGTATTTCCTGCGGTATAGCCTCTATCTTTTGAATCGAC 1959 Query 62253 CCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 62312 ||| | | || ||| ||||| || || || ||| || | | |||| | Sbjct 1960 CCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAAGCCCATGTTAGTTAGA 2019 Query 62313 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 62372 | || ||||| | || || || || || || || |||| || | || ||||| Sbjct 2020 TCCTGCAGCAGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAA 2079 Query 62373 ATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 62432 | || || ||||| || | ||| |||||||| || | ||||| ||||| || || Sbjct 2080 ACGTTCGATGTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCC 2139 Query 62433 GTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTT 62492 |||||||| || |||| || || || | | ||||| | || || || || Sbjct 2140 GTCGGCATCGGAGCCAACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTC 2199 Query 62493 AGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATA 62552 | | |||| ||||| ||| || || | || || || Sbjct 2200 AACTCTGCCCAGTTCCATAGAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATG 2259 Query 62553 CCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 62611 || || || | | | ||| | || || ||||| ||||| || | || | || Sbjct 2260 CCTTTGCTTACCGGGCTGCCCT-CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTC 2318 Query 62612 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 62671 || || || || | || || || || ||||||||||| |||| | || || | ||| Sbjct 2319 GCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTG 2378 Query 62672 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAAC 62731 || ||| ||| || | ||||| | | || ||||| || || | || || || Sbjct 2379 AGCCTCCTCGCTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCAC 2438 Query 62732 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 62791 ||| || ||||| ||||| || | | | || ||| | ||| || || | ||| || || Sbjct 2439 ACCGATGCCGATGGGTCTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTA 2498 Query 62792 ATTAATATCTATAATTTTATTGAGATTTC-TGACAATTACTTTGACCACATCCTTCAGTT 62850 |||| || || ||||| || ||||| | || || | | |||| |||| |||||||| | Sbjct 2499 GTTAACGTCAATGATTTTGTTCAGATTGCGTGTCACT-ATTTTGGCCACTTCCTTCAGCT 2557 Query 62851 TGAGAAAATCAAA----TCGCCCATCTATTACAAACATGTTCAAGGCAACAGATGCCAGA 62906 | |||||| | | | || || |||| |||||||||| |||| || || ||| Sbjct 2558 TAGCAAAATCGTACGTTTTGTCCTGCT-TTACGAACATGTTCAGCGCAATCGAGGCTAGA 2616 Query 62907 TTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTAC 62964 || || || |||| || | | | | || || | | ||||| ||||| || || Sbjct 2617 TTGCACACCGCTATTTCGTCCTTGGA--CGAGTACTCCACAATCTCGGTGCACAGGTTGG 2674 Query 62965 TACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 63024 ||||||||| || || | || || ||||| ||||| |||||||||||||| || | Sbjct 2675 AACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACA 2734 Query 63025 GAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 63084 | ||| | || ||| ||||||| ||| || || || || || ||| | | | | | Sbjct 2735 GCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTGCG 2794 Query 63085 CCTTTAT-TATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAAC 63143 |||| | | | || | || | || | ||||| || |||| |||||| Sbjct 2795 CCTTCACCTGTCGAATAAAGCGACCCTCCT-TCTCGTACCCCGTGTACAGCTTCTCGAAC 2853 Query 63144 TCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCT 63203 || || ||||| || | ||||||| ||||| || | ||||||||||| |||| | Sbjct 2854 TCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATT 2913 Query 63204 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 63263 ||| ||| || || ||||| || ||||| || ||||| || || ||| | || Sbjct 2914 TCGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCC 2973 Query 63264 CTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 63323 | || || || || || || || || || ||||||||||| ||| | | ||||| Sbjct 2974 CGGGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATCT 3033 Query 63324 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 63383 |||||||| || | || || || | |||||||||||||||| || ||||| || Sbjct 3034 CCGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCG 3093 Query 63384 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCA 63443 | || | || || || || || || | |||||| || | | |||||||| || || Sbjct 3094 ACATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCG 3153 Query 63444 TTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTC 63501 || ||||| || || || |||| | || || || | | | || | | || || | Sbjct 3154 TTCGTACCAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCA--GGCCAATAC 3211 Query 63502 CCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGC 63561 | || || ||| || || | || || | || | ||| || ||||||||||| || | Sbjct 3212 CACCGGCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATAC 3271 Query 63562 TATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCAT 63621 | |||||| |||| | || ||||||||| ||||| ||| | || || |||| Sbjct 3272 TGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCG 3331 Query 63622 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAA 63681 ||| | ||| || ||||| || || || | || || || ||||||||||| || | Sbjct 3332 CAAACATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGA 3391 Query 63682 TAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 63741 | |||| || || || || || || | ||||| ||||| | ||||||||| | Sbjct 3392 TCGCTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGCTGTG 3451 Query 63742 GTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAAC 63801 | | || || ||||| || || |||| ||| || ||| |||||| |||||||| | Sbjct 3452 GCCGCTCGACAATCTTACCCTTGATCTTCAGCAAATACGATCGTTCCAAGGTTTTAAATC 3511 Query 63802 CAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 | ||||||||||| ||| || || |||||||| || ||||||| || Sbjct 3512 CGAAATAGTTGTACCCAAAATCGCGATCGTAAATGATCGCCGAGTTCAG 3560 >seq2119 Length=1501809 Score = 140 bits (154), Expect = 4e-28 Identities = 188/259 (73%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351 || ||||||| ||| || || || ||||| || || ||||| | ||| || ||||| Sbjct 1234982 TTGAACATCAGACAGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 1235041 Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411 || || |||||||| ||||| ||||||||||| || ||||| || || |||||||| | Sbjct 1235042 GAGAAGGTGAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTT 1235101 Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33471 ||| |||||||| ||||| || || ||||| || | || | || ||| | ||| Sbjct 1235102 CCACTGAAGAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGC- 1235160 Query 33472 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33526 || || || ||||| || | ||||| || |||||||| || || || |||| || Sbjct 1235161 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 1235219 Query 33527 TTTCTATGGCATTAAAGAG 33545 |||| ||||| ||||| || Sbjct 1235220 TTTCGATGGCGTTAAACAG 1235238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622926385776680