Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1391 228 2e-54 >seq1391 Length=279726 Score = 228 bits (252), Expect = 2e-54 Identities = 590/886 (67%), Gaps = 16/886 (2%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| ||| | ||||| || || || ||||| ||| | ||||| || || || |||||| Sbjct 3476 ATCAAGGGTAAGATTGTCGAGCGGCCACAGCACATGCTGATGCGCGTCGCCATCGGTATC 3417 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-T 363547 || || || | ||||| ||||| ||||| || || || || || | | | || | Sbjct 3416 CACGGCGAAGACATCGATGCAGCGATCGAAACGTACAATCTGCT--GTCCGAGCGCTACT 3359 Query 363548 TCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607 |||| || || | || || |||| || | || | || ||| ||||||| | Sbjct 3358 TCACCCATGCTTCACCGACCATGTTTGCGGCGGCCACGCAGCGGCCCCAGCTGTCTTCCT 3299 Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667 | ||||| || | ||| || || ||||||||||||| || || || ||| | | Sbjct 3298 GTTTTCTGCTGACCATGTCCGATGACAGTATCGAGGGTATCTACGATACGCTCAAGCAGT 3239 Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCA 363726 |||| ||||||||||| ||| || || ||||| | | || | ||| | || || Sbjct 3238 GTGCCCTTATTTCCAAATCTGCCGGTGGTATTGGCCTGAACG-TGCACTGCATCCGCGCG 3180 Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 || | ||||| || || ||| || || || ||||| || ||| | || Sbjct 3179 AAGGGAACGTACATATCTGGTACGAACGGAATTTCAAACGGACTGGTGCCGATGTTGCGC 3120 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 |||| ||||||| || |||| |||||||||||||| || || || ||||| Sbjct 3119 GTGTACAACAATACGGCACGGTATGTCGACCAGGGTGGCAACAAACGGCCTGGAGCGTTC 3060 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 ||||| ||||||||||| || | ||||| || |||||||| || || ||||||| Sbjct 3059 GCTATCTATCTCGAGCCGTGGCACGGAGATATATTCGAGTTTCTCGATCTTAAGAAAAAC 3000 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 || || ||||| || |||| || || || |||| || || || ||| | | || | Sbjct 2999 ACCGGCAAAGAAGAGGTGCGAGCCCGGGACATGTTTTACGCCCTCTGGATACCGGATCTG 2940 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCT--TTTGCCCACACGAATGTC 364024 || |||||||| || ||||| | | ||| || | ||| | || || ||||| |||| Sbjct 2939 TTCATGAAGCGTGTCGAGGC--GAACGAAATGTGGAGTCTGATGTGTCCGCACGACTGTC 2882 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATC 364082 | || | ||||| ||||| || || | | ||| || ||| ||| || Sbjct 2881 CCGGATTGGCCGATTCGTGGGGCGAAGAGTTCGAGAAGCTGTACACG--GGGTACGAGAA 2824 Query 364083 GGAGGGAAAGGCTCGTAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 |||||| | | | |||| | || ||| | ||||||||||| ||||| || | Sbjct 2823 GGAGGG-TCGCTTTATTCGACAGGTGAAGGCGCAGGACCTATGGTTTGCTATCATCGAGT 2765 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 ||||| |||| || || ||| || ||| ||||||| ||| |||| || || ||| || Sbjct 2764 CGCAGGTTGAAACGGGTGTACCGTACATGCTGTACAAGGATGCGTGTAATCGTAAGAGCA 2705 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACA 364261 | |||||| || |||| || || || |||||| || ||||||||| | || ||| Sbjct 2704 ATCAGCAGAACATTGGCACCATCAAGTGTTCCAACCTGTGCACCGAGATTGTGGAGTACT 2645 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 | | ||||| | || || || || || || ||||| ||||| Sbjct 2644 CGTCCAAGGACGAAATAGCGGTGTGCAATCTAGCCTCGATTGCGCT 2599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303308962990286