Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1391 320 2e-82 seq2452 152 5e-32 seq147 123 2e-23 >seq1391 Length=279726 Score = 320 bits (354), Expect = 2e-82 Identities = 993/1513 (66%), Gaps = 44/1513 (3%) Strand=Plus/Plus Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114 || || || ||||| |||||||| | || ||| || | || ||||| || ||| | Sbjct 2035 TGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATGTGTAC 2094 Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174 || || || || || |||||||| |||||||| || |||| || || ||||| ||| Sbjct 2095 GGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCGGAGCC 2154 Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234 | || || || ||||| | ||||||||| || | |||||| | | |||| | | Sbjct 2155 AACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGCCCAGTTC 2214 Query 145235 CATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGG 145294 ||||| | || ||| | || |||||| |||||||||| ||||| | ||| | ||| Sbjct 2215 CATAGAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCTTACCGGG 2274 Query 145295 CTGCCTTGAAAGGAACTGTAACTGCCC--CAAGTTTTGGCGAGCTCGCAACTCGCCTCCA 145352 ||||| | | | ||| | | || || | ||| | |||||| || || |||| Sbjct 2275 CTGCCCTCGTACGTTTCGTA-CGGTCCATCACGAGC-GGCCAACTCGCAGCTAGCTTCCA 2332 Query 145353 GAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAG-CAGCATC---GCTTCATCG 145408 | || || | || || || ||| ||| | |||||| ||| | || || ||| Sbjct 2333 GCGCTCCATAGTAGATGGTTTCG--AATAT--CTGTTGGTTCAGTTTTTGAGCCTCCTCG 2388 Query 145409 CTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCG 145468 || |||||||| ||||| || | || |||||||| | ||||| | || | |||| Sbjct 2389 CTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCCG 2448 Query 145469 ATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCG 145528 ||||| | || ||||||| | | ||| | | ||| || ||| ||| Sbjct 2449 ATGGGTCTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTAGTTAACGTCA 2508 Query 145529 ATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCA 145588 || ||||| |||| || || |||| || | | | | || ||| |||| || Sbjct 2509 ATGATTTTGTTCAGATTGCGTGTCACTATTTTGGCCACTTCCTTCAGCTTAGCAAAATCG 2568 Query 145589 AACCGAG---CCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAA 145645 || ||| | |||| || | || | || ||||| || | ||| || Sbjct 2569 TACGTTTTGTCCTGCTTTACGAACA------TGTTCAGCGCAATCGAGGCTAGATTGCAC 2622 Query 145646 ACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTG 145705 || || | || || | ||| | || ||||||| ||||| ||| ||| ||| Sbjct 2623 ACCGCTATTTCGTCCTTGGACGAGTACTCCACAATCTCGGTGCACAGGTTGGAACACTTG 2682 Query 145706 ATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTAC 145765 ||||| || | || |||||||| || || | || ||||| |||||||| ||||||||| Sbjct 2683 ATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACAGCATGTAC 2742 Query 145766 GGTCCGCCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCGCACGCA 145823 ||| | || || || ||||||| ||| | |||| |||| | | ||||||||| || Sbjct 2743 GGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCAT--AGGTCCTGCGCCTTCA 2800 Query 145824 CCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAAC 145883 |||| | |||| ||||| | ||||| | |||| |||| ||| ||| | | Sbjct 2801 CCTGTCGAATAAAGCGACCCTCCTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGC 2860 Query 145884 CGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGG 145943 | | |||||| || |||||||| | || ||||||||||| ||| | |||| | Sbjct 2861 CCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATTTCGTTCG 2920 Query 145944 CGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTT 146003 | | ||| |||| ||| |||| ||| || | ||| || ||||| | || ||| || || | Sbjct 2921 CCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCCCGGGC-T 2979 Query 146004 TGCA-ATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT---ATAGATGTCCGCG 146059 ||| || || || ||||| ||| | || || | ||| ||| || || || Sbjct 2980 CGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAG-AAACTCGAATATATCTC--CG 3036 Query 146060 TGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGT---TTGCCACCCTGGTCCACG 146116 |||||||| || | ||||| |||| ||||| ||| |||||||||||||| || Sbjct 3037 TGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCGACA 3096 Query 146117 TGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTC 146176 | ||| || | ||||| | ||||||| ||| ||| | | ||| | | | |||||| Sbjct 3097 TACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCGTTC 3156 Query 146177 GTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCG 146236 ||| ||| || || | ||| | ||| || || |||| ||| | ||| ||| Sbjct 3157 GTACCAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGGCCAATACCACCG 3216 Query 146237 CCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCG 146296 | | ||||| ||| ||| || | |||||| |||||||| || || || || || Sbjct 3217 GCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATACTGTC- 3275 Query 146297 CTTCGA-ATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAA 146355 | || ||| |||||||| || || ||| ||| | | | |||| |||||| || Sbjct 3276 ATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCGCAAA 3335 Query 146356 CAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCGATAG 146414 || ||||| || || || || | |||| || || ||||||||||| | Sbjct 3336 CATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGG-ACAGCAGATTGTACGTTTCGATCG 3394 Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474 | | | ||||| ||||| || || || | ||||||||||| |||||||| || |||| Sbjct 3395 CTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGCTGTGGCC 3454 Query 146475 GCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTC--TCCAGGGTTTTGTATCC 146532 |||| | | | | | ||||| | |||||| || || |||| |||||| |||| Sbjct 3455 GCTCGACAATCTTACCCTTGATCTTCAGCAAATA--CGATCGTTCCAAGGTTTTAAATCC 3512 Query 146533 GAAAAATTTGTAC 146545 |||| | |||||| Sbjct 3513 GAAATAGTTGTAC 3525 >seq2452 Length=1332465 Score = 152 bits (168), Expect = 5e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| || ||||| ||||| | |||||||||||| || |||||||||||| | Sbjct 203866 CCACCGCGCAGGCGAAGCACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGAC 203925 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || | || | |||||| || |||||||| Sbjct 203926 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGA 203985 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || || || ||| ||| ||| | | || | ||||| | || ||||| Sbjct 203986 ATTCCCTCCTTATCCTGGATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACC 204045 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || ||||| ||||| |||||||| Sbjct 204046 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 204092 >seq147 Length=443619 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 |||||||| | ||| | |||||| ||||| || ||||||||||| | ||||| Sbjct 111913 CGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCA 111854 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| | |||||||| || || || || ||||| ||| Sbjct 111853 TCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGGGAATGCCTTCCTTG 111794 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||| | | ||| | || || | | ||||| |||| || | | Sbjct 111793 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCGAGTGTGATG 111734 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || |||||||| ||||||||||||||| Sbjct 111733 GTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCATG 111698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471997028872320