Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1391 334 1e-86 seq2119 113 6e-20 >seq1391 Length=279726 Score = 334 bits (370), Expect = 1e-86 Identities = 1190/1849 (64%), Gaps = 22/1849 (1%) Strand=Plus/Plus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || || || || || | |||||||| || ||||| | || | |||| ||||||||| Sbjct 1720 GCCGGCTTGGTGCGCAAGTAGTACATGCCAGTTTTCAATCCCATCTTCCAACCGTAAAAA 1779 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 1780 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCGGCGACGTGAATGTTGAACGATTGCGAC 1839 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 |||||||| || ||||||| || || |||||||| || ||| || | || ||| Sbjct 1840 TGATCGATAAACGCTCCCCGATCCGCTGCCATTTTGATGCACGTTTTCACCGATATCTCC 1899 Query 62051 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATGGAT 62107 || | ||||| || | |||| || | || | | | | | ||| | ||||| || Sbjct 1900 CAGACCGTTTTGTACAGGTCGCGTATTTCCTGCGGTATAGCCTCTATCTTTTGAATCGAC 1959 Query 62108 CCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 62167 ||| | | || ||| ||||| || || || ||| || | | |||| | Sbjct 1960 CCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAAGCCCATGTTAGTTAGA 2019 Query 62168 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 62227 | || ||||| | || || || || || || || |||| || | || ||||| Sbjct 2020 TCCTGCAGCAGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAA 2079 Query 62228 ATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 62287 | || || ||||| || | || |||||||| || | ||||| ||||| || || Sbjct 2080 ACGTTCGATGTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCC 2139 Query 62288 GTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTT 62347 |||||||| || |||| || || || | | ||||| | || || || || Sbjct 2140 GTCGGCATCGGAGCCAACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTC 2199 Query 62348 AGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATA 62407 | | |||| ||||| ||| || || | || || || Sbjct 2200 AACTCTGCCCAGTTCCATAGAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATG 2259 Query 62408 CCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 62466 || || || | | | ||| | || || ||||| ||||| || | || | || Sbjct 2260 CCTTTGCTTACCGGGCTGCCCT-CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTC 2318 Query 62467 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 62526 || || || || | || || || || ||||||||||| |||| | || || | ||| Sbjct 2319 GCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTG 2378 Query 62527 CGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 62586 || ||| ||| || | ||||| | | || ||||| || || | || || || Sbjct 2379 AGCCTCCTCGCTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCAC 2438 Query 62587 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 62646 ||| || ||||| ||||| || | | | || ||| | ||| || || | ||| || || Sbjct 2439 ACCGATGCCGATGGGTCTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTA 2498 Query 62647 ATTAATATCTATAATTTTATTGAGATTTC-TGACAATTACTTTGACCACATCCTTCAGTT 62705 |||| || || ||||| || ||||| | || || | | |||| |||| |||||||| | Sbjct 2499 GTTAACGTCAATGATTTTGTTCAGATTGCGTGTCACT-ATTTTGGCCACTTCCTTCAGCT 2557 Query 62706 TGAGAAAATCAAA----TCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGA 62761 | |||||| | | | || || |||| |||||||||| |||| || || ||| Sbjct 2558 TAGCAAAATCGTACGTTTTGTCCTGCT-TTACGAACATGTTCAGCGCAATCGAGGCTAGA 2616 Query 62762 TTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTAC 62819 || || || |||| || | | | | || || | | ||||| ||||| || || Sbjct 2617 TTGCACACCGCTATTTCGTCCTTGGA--CGAGTACTCCACAATCTCGGTGCACAGGTTGG 2674 Query 62820 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 62879 |||||||||||| || | || || ||||| ||||| |||||||||||||| || | Sbjct 2675 AACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACA 2734 Query 62880 GAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 62939 | ||| | || ||| ||||||| ||| || || || || || ||| | | | | | Sbjct 2735 GCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTGCG 2794 Query 62940 CCTTTAT-TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAAC 62998 |||| | | | || | | | || | ||||| || |||| |||||| Sbjct 2795 CCTTCACCTGTCGAATAAAGCGACCCTCCT-TCTCGTACCCCGTGTACAGCTTCTCGAAC 2853 Query 62999 TCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCT 63058 || || ||||| || | ||| ||| ||||| || | ||||||||||| |||| | Sbjct 2854 TCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATT 2913 Query 63059 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 63118 ||| ||| || || ||||| || ||||| || ||||| || || ||| | || Sbjct 2914 TCGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCC 2973 Query 63119 CTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 63178 | || || || || || || || || || ||||||||||| ||| | | ||||| Sbjct 2974 CGGGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATCT 3033 Query 63179 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCT 63238 |||||||| || | || || || | |||||||||||||||| || ||||| || Sbjct 3034 CCGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCG 3093 Query 63239 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCA 63298 | || | || || || || || || | |||||| || | | || || || | || Sbjct 3094 ACATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCG 3153 Query 63299 TTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTC 63356 || || || || || || |||| | || || || | | | || | | || || | Sbjct 3154 TTCGTACCAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCA--GGCCAATAC 3211 Query 63357 CCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATAC 63416 | || || ||| || || | || || | || | |||||| ||||| ||||| |||| Sbjct 3212 CACCGGCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATAC 3271 Query 63417 TATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCAT 63476 | ||||| |||| | || ||||||||| ||||| ||| | || || |||| Sbjct 3272 TGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCG 3331 Query 63477 TAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAA 63536 ||| | ||| || ||||| || || || | || || || ||||||||||| || | Sbjct 3332 CAAACATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGA 3391 Query 63537 TAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 63596 | |||| || || || || || || | ||||| ||||| | ||||||||| | Sbjct 3392 TCGCTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGCTGTG 3451 Query 63597 GTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAAC 63656 | | || || ||||| || || |||| ||| || ||| |||||| |||||||| | Sbjct 3452 GCCGCTCGACAATCTTACCCTTGATCTTCAGCAAATACGATCGTTCCAAGGTTTTAAATC 3511 Query 63657 CAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 | ||||||||||| ||| || || |||||||| || ||||||| || Sbjct 3512 CGAAATAGTTGTACCCAAAATCGCGATCGTAAATGATCGCCGAGTTCAG 3560 >seq2119 Length=1501809 Score = 113 bits (124), Expect = 6e-20 Identities = 182/259 (70%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 32649 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 32708 || ||||||| ||| || || || |||||||| || ||||| | ||| | ||||| Sbjct 1234982 TTGAACATCAGACAGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 1235041 Query 32709 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 32768 || || |||||||| ||||| ||||||||||| || ||||| || || || || || | Sbjct 1235042 GAGAAGGTGAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTT 1235101 Query 32769 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 32828 ||| ||||| || ||||| || || ||||| || | || | || ||| | ||| Sbjct 1235102 CCACTGAAGAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGC- 1235160 Query 32829 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 32883 || || || ||||| || | ||||| || |||||||| || || || |||| | Sbjct 1235161 CT-TCTTGCTCGAGATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 1235219 Query 32884 TCTCTATAGCATTAAAGAG 32902 | || || || ||||| || Sbjct 1235220 TTTCGATGGCGTTAAACAG 1235238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633610828770800