Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1669 136 3e-27 seq2452 98.7 9e-16 >seq1669 Length=235595 Score = 136 bits (150), Expect = 3e-27 Identities = 217/306 (71%), Gaps = 8/306 (3%) Strand=Plus/Plus Query 50982 CACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTT 51041 ||| || || ||||||||||| || | |||||||| || | ||| ||||||| |||| Sbjct 204617 CACATTGAATTTACGCTTACATCCTTCATAGTTCATGTATCGAATTTTGCCAAAGATTTC 204676 Query 51042 GCG-TTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACATAA 51099 ||| | ||| ||| |||| ||||| | |||| || |||||||| ||||| || || Sbjct 204677 GCGCTCCTTCCAAC--CCTGATCGTGAATACCGGCGATCGACCACATGCAACCGACGTAC 204734 Query 51100 TTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAAT 51159 ||| |||||||| ||||||| ||| || ||||||| ||| | || || | | Sbjct 204735 CCGTTTGGATCGCGCCCATCCAGGCTATACCGATCGTTAAGATAGATCGCCGTCTCAAGC 204794 Query 51160 GCCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAA 51219 || || | | |||||| |||| || || || ||||| ||||| |||| | | Sbjct 204795 GCTTCCTCGGGCGTTTTCGTCCACTCCAGTATCTTTTTCGCCCAATACATCCGCAGGAAG 204854 Query 51220 CCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGT 51277 || |||||||||||||| || | | |||| || ||||||||||||| ||||| | Sbjct 204855 CCATGCATCTTGCCCTCCTTCACC--ATCTGCAGCTGCGCCGAGTTCCACAGATCGTCAT 204912 Query 51278 GAGTTT 51283 | |||| Sbjct 204913 GCGTTT 204918 >seq2452 Length=1332465 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | || ||||| |||| || | || || ||| | || Sbjct 204092 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCG 204033 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| ||||| || ||| || || || || ||||| || || ||| Sbjct 204032 GATACGATCGAAAATGTGAAGGCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGATCAA 203973 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | |||||||||||||| || | || |||| |||||| || ||||||||| Sbjct 203972 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGTCCGATTACAAC 203913 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || ||||| ||||| Sbjct 203912 ATCCAGAAGGAGTCGACCCTTCATTTGGTGCT 203881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433313883392495