Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1391 260 1e-64 seq2452 132 4e-26 seq147 116 3e-21 seq1878 107 2e-18 seq890 93.3 4e-14 >seq1391 Length=279726 Score = 260 bits (288), Expect = 1e-64 Identities = 1054/1643 (64%), Gaps = 38/1643 (2%) Strand=Plus/Plus Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838 |||||||| ||||||| || || | | | ||||||||||||||||| ||||||||||| Sbjct 1690 TTGTCCACCGTAAATTGGATCGCATTCACAGCCGGCTTGGTGCGCAAGTAGTACATGCCA 1749 Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898 |||||||| || | |||||| || | || |||| |||| | | ||| | || Sbjct 1750 GTTTTCAATCCCATCTTCCAACCGTAAAAATGGATCGACGTCAGCTTGCCATAGTTTGGC 1809 Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958 | | ||| || || ||||| ||||| ||||| | || ||||| || ||| Sbjct 1810 TCGGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCTCCCCGATCCGCTGCC 1869 Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018 || || | ||||||| || ||||| ||||||||||| || || | | | Sbjct 1870 ATTTTGATGCACGTTTTCACCGATATCTCCCAGACCGTTTTGTACAGGTCGCGTATTTCC 1929 Query 129019 TTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATC 129078 | ||||| | || || || || | || ||||| | | ||||| ||| ||| Sbjct 1930 TGCGGTATAGCCTCTATCTTTTGAATCGACCCATTGTTGGACAGAATTTCGTTCTTCATG 1989 Query 129079 TGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTGA 129138 | | |||| || || | | ||| | || | | ||| | || || Sbjct 1990 TCGAGATCCCACAAGCCCATGTTAGTTAGATCCTGCAGCAGATGGTGGTTCACCACCTGG 2049 Query 129139 AAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTCA 129198 || || |||| || ||||||| ||||| ||| ||| ||||||| ||||||||| Sbjct 2050 AACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATGTGTACGGCTCGAACGATTCA 2109 Query 129199 TTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCAC--GCAAAGCGAGT 129256 || ||||| | ||||| || || | || || ||||| ||||| |||| ||||| Sbjct 2110 TTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCGGAGCCAACAGCAA--CGAGT 2167 Query 129257 TTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATGTGG 129316 | || | |||||||| ||| | || || || | || ||||| ||| | | || | Sbjct 2168 TGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGCCCAGTTCCATAGAGTCGTAG 2227 Query 129317 GTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGTAGG 129376 | | ||||||| ||||| |||| || || || | || ||| ||| | Sbjct 2228 GCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCTTACCGGGCTGCCCTCGTACG 2287 Query 129377 AATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAAATAAA 129436 |||| | || | | ||||| ||||| || ||||||| || ||| | || | Sbjct 2288 TTTCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAGCTTCCAGCGCTCCATAGTAGA 2347 Query 129437 TTGTTTCGGCAATTTTGGT--GTTCAACACTTTGGCCTGGTCGCTTTCGTACGGCATA-C 129493 | |||||| ||| | || ||||| || |||| |||||||||||||| ||| | Sbjct 2348 TGGTTTCG--AATATCTGTTGGTTCAGTTTTTGAGCCTCCTCGCTTTCGTACGG-ATAGC 2404 Query 129494 GCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTTC 129553 ||| || | || | ||||||| || || | ||| | |||||||||| || Sbjct 2405 GCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCCGATGGGTCTGTGGCGCA 2464 Query 129554 TATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAAT 129613 | ||||| | ||| | || || |||||||| | ||| || |||||||| | || Sbjct 2465 TGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTAGTTAACGTCAATGATTTTGTTCAGAT 2524 Query 129614 T-CTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTAC----TCGCCTAC 129668 | | || | || ||||| | || | || | | | |||||| |||| | ||| | Sbjct 2525 TGCGTGTC-ACTATTTTGGCCACTTCCTTCAGCTTAGCAAAATCGTACGTTTTGTCCTGC 2583 Query 129669 AT--CGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCG 129726 | ||| ||| || | | ||||||||| | |||||| || || ||||| Sbjct 2584 TTTACGA-----ACATGTTCAGCGC----AATCGAGGCTAGATTGCACACCGCTATTTCG 2634 Query 129727 TTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAA 129786 | ||| |||||| ||||| |||| ||||| || | || |||||||| | Sbjct 2635 TCCTTGGACGAGTACTCCACAATCTCGGTGCACAGGTTGGAACACTTGATGGTGCCAATG 2694 Query 129787 TGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTT 129846 | || ||||| || || || || ||||| ||||||| ||||||||| |||||| Sbjct 2695 TTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACAGCATGTACGGTACACCCGTT 2754 Query 129847 TCGACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTACAAAT 129906 || || |||| |||| || | | | ||| | ||||| | ||||| | ||| Sbjct 2755 TCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTGCGCCTTCACCTGTCGAATAAAG 2814 Query 129907 TTGCCACATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGTGTCG 129966 || |||||||| || ||||| | || || ||| ||| ||| ||| Sbjct 2815 CGACCCTCCTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCC--ACGAA-TCG 2871 Query 129967 AGCAAC---GGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGT 130023 ||| || | || |||||||||||| |||||||||| | | ||| ||||| || Sbjct 2872 GCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATTTCGTTCGCCTCGACACGC 2931 Query 130024 TTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTCG 130083 ||||| |||| ||| |||| ||| |||||||| |||| || || ||| || || Sbjct 2932 TTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCCCGGGCTCGCACCTCTTCT 2991 Query 130084 GCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACA 130143 || |||| || || || || || ||| | || || |||||||||| || | | Sbjct 2992 TTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATCTCCGTGCCACGGCTCGAGA 3051 Query 130144 TAAATTGCCATTGCGCCCTTCCGT---TTGCCCCCTTGGTCAACGTGGCGCACGGCATTG 130200 || || || | || || |||| ||||| || ||||| || | || | | |||| Sbjct 3052 TAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCGACATACCGTGCCGTATTG 3111 Query 130201 TTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAA 130260 ||||| || |||||||| | | ||| |||||| | | ||||| || | ||| | Sbjct 3112 TTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCGTTCGTACCAGATATGTAC 3171 Query 130261 CTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATC 130320 | || || || | | || ||| | || || || || ||| || |||| || || Sbjct 3172 GTTCCCTTCGCGCGGATGCAGTGCACGTTCAGGCCAATACCACCGGCAGATTTGGAAATA 3231 Query 130321 AACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAG 130379 | || || | || | ||||| || || || || |||||||||| || ||| | || Sbjct 3232 AGGGCACACT-GCTTGAGCGTATCGTAGATACCCTCGATACTGTCATCGGACATGGTCAG 3290 Query 130380 GAGGAAACACGAGGCCAATTGGG 130402 || ||||| || | || |||| Sbjct 3291 CAGAAAACAGGAAGACAGCTGGG 3313 >seq2452 Length=1332465 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || ||||| | || ||||| || | || ||||| || || || Sbjct 204095 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 204036 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || || |||||||| ||||| || ||| Sbjct 204035 TCGGATACGATCGAAAATGTGAAGGCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGAT 203976 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| ||||| || ||||||||||| ||| | |||||| ||||| | ||||||||| Sbjct 203975 CAACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGTCCGATTAC 203916 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || ||| | ||||| || | || ||||||| ||| Sbjct 203915 AACATCCAGAAGGAGTCGACCCTTCATTTGGTGCTTCGCCTGCGCGGTGGT 203865 >seq147 Length=443619 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| ||||| || |||||| | || || || || |||| || || || || | Sbjct 111695 AAACATGCAGATTTTCGTGAAAACTCTTACTGGCAAGACCATCACACTCGAGGTCGAGCC 111754 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || || | || || | || || || || |||||||| || ||||| || || Sbjct 111755 TTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGA 111814 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || || || || || |||||||| ||| | |||||| ||||| |||| ||||| Sbjct 111815 TCAGCAGCGACTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCTGATTA 111874 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| || || ||||| ||| | ||| | || ||||| | || |||||| Sbjct 111875 CAACATCCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTTCGTGGAGGT 111926 >seq1878 Length=248525 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| |||| || || ||| | || || || ||| | | Sbjct 208598 ATGCAGATTTTTGTCAAAACGCTAACTGGAAAGACGATTACACTGGACGTGATCGCGTCG 208539 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || ||| || |||||| | ||||| || | || || ||| |||| ||||| Sbjct 208538 GAAACGGTGCTGGACATCAAAAACAAAATCGAAACCCGCGAAGGCATTGCACCAGATCAG 208479 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||||||||||||||| || ||| || | | | |||||||||||| Sbjct 208478 CAGCGCATCATCTTTGCCGGCAAACAGTTGGACGATGGTCGGATCATATCCGATTACAAC 208419 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTG 22437 ||||| | | ||| || || ||| | || |||||||| Sbjct 208418 ATTCAGCATGGATCGACAATGCATCTGGTGCTGCGATTG 208380 >seq890 Length=1089215 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 22315 AAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 |||||||| || ||||| ||||| || ||||| || ||||||||||| ||| | |||||| Sbjct 230248 AAGGAGGGCATCCCACCAGATCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGAT 230307 Query 22375 CACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 ||||| | || || || |||||||| || |||||||| | ||| | ||| | || Sbjct 230308 GGTCGCACTCTTTCGGACTATAACATTCAGAAGGAATCCACGCTCCATCTGGTTCTCCGT 230367 Query 22435 TTGCGCGGAGG 22445 |||| || || Sbjct 230368 CTGCGTGGTGG 230378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419714326442245