Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1920 172 1e-37 seq147 163 5e-35 seq2452 152 9e-32 seq2119 87.8 3e-12 >seq1920 Length=889085 Score = 172 bits (190), Expect = 1e-37 Identities = 323/473 (68%), Gaps = 4/473 (1%) Strand=Plus/Plus Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317 |||||| || || || || ||| ||| |||||||| || ||||||| ||| | || || Sbjct 343139 CCACATCGCCTCAACGTAATCCTTCGCGTGGCCCCAGTCACGCTTTGAGTCGAGATTGCC 343198 Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCG--CGAGTGATTTTT 268375 || ||| ||| ||||| |||||| | ||| | ||| || |||||||| Sbjct 343199 CAGCTCCAGATATTCCTGCTGACCGAGCGAAATCTTTGCCA--CCGAACGGGTGATTTTG 343256 Query 268376 CGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCAC 268435 || ||||| || |||| || || | || |||||| ||||| |||||||| ||||| Sbjct 343257 CGCGTCACAAAATTCTCCCCGCGGCGCGGTGACTCGTGATTGAACAGGATGCCATTGCAG 343316 Query 268436 GCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCA 268495 |||||||| | || || ||||| ||||| | || ||||||| | ||||||| ||| Sbjct 343317 GCGAACATATCGTACGCTTCACGATAGTTGATTACAATCCAGTACCCGTACATCTTCGCA 343376 Query 268496 ACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACT 268555 |||||||| || || |||| ||| || ||| | || || || | || || Sbjct 343377 CAAGCGTACGGCGAGCGGGGATAGAACGGGGTCTTCTCGTTCTGCGGCGTCTCCACCACC 343436 Query 268556 TTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAG 268615 || || | || || || || || || |||||||| || ||||| | || | Sbjct 343437 TTCCCGTACAGTTCCGACGTGGACGCCTGGTAGAAGCGCACCGTCTTTTCCTGCCCCACG 343496 Query 268616 ATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCC 268675 | || || || |||||||| || || || || | ||||||| || || || || || Sbjct 343497 GTACGAATCGCATCGAGCAACCGTAGCGTACCGACTGCATCCACCTCGGCCGTGTATTCG 343556 Query 268676 GGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTC 268728 || ||||| || | || ||| |||||||||||| |||| ||||| | ||| Sbjct 343557 CTCAGATCGAACGAAATCTTGACGTGGCTCTGGGCGGCCAGATTATATATCTC 343609 >seq147 Length=443619 Score = 163 bits (180), Expect = 5e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || || ||||| ||||| |||| |||| || || || || || || |||||||| ||| Sbjct 111931 TACTTACCTCCACGAAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAA 111872 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 || ||||| || | ||||| || | |||||| |||||||| ||||||| || || || Sbjct 111871 TCAGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCT 111812 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 || ||||||||||||||||| || ||||| ||||| || |||||| ||||| | | Sbjct 111811 GGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGC 111752 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | |||||||| || || || || || || ||||| |||||||| Sbjct 111751 TCGACCTCGAGTGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 111699 >seq2452 Length=1332465 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | ||||| || || || ||||| || |||||||| |||||||| Sbjct 203866 CCACCGCGCAGGCGAAGCACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGAC 203925 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | ||||| || || ||| Sbjct 203926 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGA 203985 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| ||||| || ||||| || || | | || || Sbjct 203986 ATTCCCTCCTTATCCTGGATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACC 204045 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| || ||||||||||| |||||||| |||||||| Sbjct 204046 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 204092 >seq2119 Length=1501809 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/140 (75%), Gaps = 7/140 (5%) Strand=Plus/Plus Query 9895 AGAAGTCTGCGTCAATTGCAAACACGTTGTCGT--CGGCATT---CATGACGCCCGCCTT 9949 ||||||| || || | | |||||||||||| ||| || ||| |||||| ||| Sbjct 1234579 AGAAGTCGGCATCGAGCGTGAACACGTTGTCGAGACGG--TTGGCCATCACGCCCCACTT 1234636 Query 9950 CTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTC 10009 ||||||||| |||| |||||| ||||| | |||||||||||| || |||| ||| Sbjct 1234637 CTGGTACTCACCTACCTTCTTCTCGAAAAAGTTCGTCTTGCCCTCGAGCGAGATGAACTC 1234696 Query 10010 CATGAAGTCAAAGGGGTTCT 10029 ||||||| |||||||||| Sbjct 1234697 CATGAAGCTGAAGGGGTTCT 1234716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921591606291560