Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28]
2,673 sequences; 223,486,714 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq147 109 5e-19
seq2452 84.2 2e-11
seq1878 82.4 6e-11
>seq147
Length=443619
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213
|||| ||||| |||| || || | ||| | || ||||| || || |||||||||||
Sbjct 111927 TACCTCCACGAAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAG 111868
Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273
| ||| ||| ||| || || || || || ||| ||||||| ||||| || || || |
Sbjct 111867 AGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGG 111808
Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333
|||||||||| ||||| ||||| || | | || | ||||| | | ||||
Sbjct 111807 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGA 111748
Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
| || | || | || ||||| || |||||||| || ||||||||||||
Sbjct 111747 CCTCGAGTGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCATG 111698
>seq2452
Length=1332465
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
|| ||||| | || || || || || |||||||||||| || || ||| ||| ||
Sbjct 203884 ACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGCGTGCGACCATCCTCC 203943
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293
|| || || || || | || ||||||||||| ||||||||||| || || || ||
Sbjct 203944 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTATCCTGG 204003
Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353
||||| || | | ||| | || || | || ||||| || | ||| | || ||
Sbjct 204004 ATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTA 204063
Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || || ||||| || || ||||||||
Sbjct 204064 CCCGTGAGGGTTTTGACGAAGATCTGCAT 204092
>seq1878
Length=248525
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/211 (69%), Gaps = 8/211 (4%)
Strand=Plus/Plus
Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTG 114238
||| || || ||| | | ||||||||||||||| || | ||| ||| || | ||
Sbjct 208395 ATGCATTGTCGATCCATGCTGAATGTTGTAATCGGATATGATCCGACCATCGTCCAACTG 208454
Query 114239 TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATC-- 114296
||| || || |||||| ||||| || || || | ||||||||| ||| ||
Sbjct 208455 TTTGCCGGCAAAGATGATGCGCTGCTGATCTGGTGCAATGCCTTC----GCGGGTTTCGA 208510
Query 114297 TTTTGTTTTAGCTGTTCA--ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGC 114354
||||||||| | ||| || || || || | | ||||||| || | ||| || |
Sbjct 208511 TTTTGTTTTTGATGTCCAGCACCGTTTCCGACGCGATCACGTCCAGTGTAATCGTCTTTC 208570
Query 114355 CGGTCAGAGTTTTTACAAAAATCTGCATGGC 114385
| || || ||||| |||||||||||||||||
Sbjct 208571 CAGTTAGCGTTTTGACAAAAATCTGCATGGC 208601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420120713202876
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |