Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1391 311 2e-79 seq2119 221 2e-52 >seq1391 Length=279726 Score = 311 bits (344), Expect = 2e-79 Identities = 952/1458 (65%), Gaps = 44/1458 (3%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTT-GCTGCTGAGCG 244148 |||||||||||| ||||| |||||||||||||| | | ||| | ||| | || || || Sbjct 2037 GTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATG-TGTACG 2095 Query 244149 GCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACA 244208 |||||| || | ||||| || || || || || || |||||||| || | || Sbjct 2096 GCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCGGAGCCA 2155 Query 244209 CCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCC 244268 ||||| ||| | | |||||| || || | | ||| ||||| || Sbjct 2156 ACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGCCCAGTTCC 2215 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 | | || | |||| | || |||||| || ||||||| | || |||| Sbjct 2216 ATAGAGTCGTAGGCTCCTTG---TT------CCACATCTCGTACTGCAGGATGCCTTTGC 2266 Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCT 244388 | || |||||||||||||| || ||| || || || || ||||| || ||||| Sbjct 2267 TTACCGGGCTGCCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAG 2326 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 | || || || | ||||||||||| ||||| ||| | ||||| | | |||| Sbjct 2327 CTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCT 2386 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 ||| | | || || ||||| ||||| | ||||||| |||||||| ||||||| Sbjct 2387 CGCTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGC 2446 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 ||||||||||||| ||| ||||||||||| | || || ||||| ||||| |||| ||| Sbjct 2447 CGATGGGTCTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTAGTTAACGT 2506 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGC--AGCTGAAA 244626 | || | ||||| || ||||| || | || | | || || |||| ||| ||| Sbjct 2507 CAATGATTTTGTTCAGATTGCGTGTCACTATTTTGGCCACTTCCTTCAGCTTAGC--AAA 2564 Query 244627 GTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCT 244686 |||||| | | |||| | | || ||| ||| || || | Sbjct 2565 ATCGTACGTTTTG---TCCTG------------CTTTACGAACATGTTCAGCGCAATCGA 2609 Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 ||| || ||||| || || | || ||| | | ||||| |||||||||||||| || Sbjct 2610 GGCTAGATTGCACACCGCTATTTCGTCCTTGGACGAGTACTCCACAATCTCGGTGCACAG 2669 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 ||| |||||||||||||| | || ||| |||||| ||| || || || ||||| Sbjct 2670 GTTGGAACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTT 2729 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||| |||||| | || | || || || | ||| | ||| || ||| ||||| Sbjct 2730 GTACAGCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCATAGGTC 2789 Query 244867 CCTAGCCTTGACC-GTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 | ||||| ||| ||| | | ||||| |||||| | |||||||| || Sbjct 2790 CTGCGCCTTCACCTGTCGAATAAAGC-GACCCTCCTTCTCGTACCCCGTGTACAGCTTCT 2848 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACG-CCGGGCACATGAGACTC 244984 ||||||| |||||| ||| | | ||||| || | || ||| ||||| |||||| Sbjct 2849 CGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACA-GTCGTGCGGACACATCAGACTC 2907 Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044 ||| || ||| ||| | || |||||| || || || ||||||||||| | || Sbjct 2908 CACATTTCGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAAC 2967 Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104 | ||||| || | | ||| || ||| ||||| ||| | || || | ||| || || Sbjct 2968 ATGTCCCGGGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAAT 3027 Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164 | || ||||||| ||||| | |||| ||||| || || ||||| |||||||| ||| Sbjct 3028 ATATCTCCGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCC 3087 Query 245165 TGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT 245220 ||||| | ||| | || || |||| | | ||||| | ||||| | ||||| Sbjct 3088 TGGTCGA-CATAC---CGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTT 3143 Query 245221 AGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT 245280 || ||||| || || ||||| | ||||| | | || | | | | || Sbjct 3144 TGAAATTCCGTTCGTACCAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCAG 3203 Query 245281 GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCC 245340 ||| | || ||||| ||||| || ||||| || ||||| || || || || Sbjct 3204 GCCAATACCACCGGCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACC 3263 Query 245341 CTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCT 245400 ||| || ||||| |||| | |||||||| ||||| |||||||||||| | | Sbjct 3264 CTCGATACTGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGT 3323 Query 245401 GCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGT 245459 | || |||| || || || ||||| ||||||| |||| || || | || Sbjct 3324 GGCCGCCGCAAACATGGTCGGTGAAGCATGGGTGAAGTAGC-GCTCGGACAGCAGATTGT 3382 Query 245460 ACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGG 245519 |||| | || | || ||||||| ||||||||||| | |||| | ||| || Sbjct 3383 ACGTTTCGATCGCTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCA 3442 Query 245520 TGTGCTGGGGCGTCTCGA 245537 ||||||| ||| ||||| Sbjct 3443 TGTGCTGTGGCCGCTCGA 3460 >seq2119 Length=1501809 Score = 221 bits (244), Expect = 2e-52 Identities = 316/439 (72%), Gaps = 11/439 (3%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 ||||| || ||||| || ||| |||| ||| | ||||||||||| |||||||| || ||| Sbjct 1235238 CTGTTTAACGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCACTGAAC 1235179 Query 42669 TGGATCGAGAGTCCCGACG--CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCG 42726 |||||| ||| | || | |||| || ||||| || | || || ||| ||||||| | Sbjct 1235178 TGGATCTCGAG-CAAGAAGGCCAACTTT-GGCGAACGGGTTGTGGCGTTTGCCGCCGTTG 1235121 Query 42727 AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-- 42784 | || ||||||||| || |||||| || ||||||||||| ||| || ||| | Sbjct 1235120 AAGGTATCTTCTTCAGTGGAAGCTTCGCTTCAATCTTCTGGCTGAAGAAGC--GTGGCCT 1235063 Query 42785 GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGA 42844 |||||| |||||||||||||||||||| || || | ||||| ||||| || | || Sbjct 1235062 GATGCCTGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTACACTGTGA 1235003 Query 42845 CTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG 42904 ||||||||| || ||||| | | || || ||||| ||||||||||| || Sbjct 1235002 CTTTGCCTGTCTGATGTTC---AAGTATCTGGTTCAGAAGCCGTCGAAGGAGCGCGTGAC 1234946 Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964 || || ||| || || || | ||||||| ||||||| || ||| || | |||||||| Sbjct 1234945 GGAGATTATCCGCGATGCTGTCGTGATCGAGCAGGAGTTTCTGACGAAGGCACTGCCCGT 1234886 Query 42965 GTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCA 43024 | || ||||||||||| || || |||| |||||||| ||| || || || | Sbjct 1234885 TGACATGCTCGGCATGAACTGTGATCTGATGTCGCAGTACATCGAGTTTGTGGCGGATCG 1234826 Query 43025 TCTCCTGTGCCAGATGGGT 43043 | | ||| | || ||||| Sbjct 1234825 TTTGCTGCTCGAGCTGGGT 1234807 Score = 96.9 bits (106), Expect = 7e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || |||||||| || || || || ||||| || || || || |||| | |||| Sbjct 1235496 CTTGCCTTCTTTGCTGCGTCCGATGGCATCGTGAACGAAAATCTGGTGGAACGCTTCAGC 1235437 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 | ||||||||| ||||||||||||||||||||||||||||| || || || || Sbjct 1235436 CAGGAGGTGCAGGTAACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAAT 1235377 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCC 42585 |||||| ||| ||||| | ||| || |||||||||||| Sbjct 1235376 GTGCACAGCGAGATGTACTCGCTGCTGATCGACACGTACATCC 1235334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944307647266480