Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1669 95.1 1e-14 seq2452 86.0 5e-12 seq147 84.2 2e-11 seq890 82.4 6e-11 >seq1669 Length=235595 Score = 95.1 bits (104), Expect = 1e-14 Identities = 203/300 (68%), Gaps = 5/300 (2%) Strand=Plus/Minus Query 37831 ACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGT 37890 ||||||| ||||||| |||| || | ||| | ||| ||||| ||||||||| | Sbjct 204909 ACGATCT---GTGGAACTCGGCGCAGCTGCAGATGGTGAAGGAGGGCAAGATGCATGGCT 204853 Query 37891 ATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTC-AGACCGCG 37949 |||| ||||||||| || || || |||| ||| | || | || | || ||| Sbjct 204852 TCCTGCGGATGTATTGGGCGAAAAAGATACTGGAGTGGAC-GAAAACGCCCGAGGAAGCG 204794 Query 37950 CTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGT 38009 || | || || ||||| || ||| ||| ||| |||| ||||| ||||| ||||| Sbjct 204793 CTTGAGACGGCGATCTATCTTAACGATCGGTATAGCCTGGATGGGCGCGATCCAAACGGG 204734 Query 38010 TACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTCCC 38069 |||||||| || ||||||| || ||| | |||||| | ||| ||| Sbjct 204733 TACGTCGGTTGCATGTGGTCGATCGCCGGTATTCACGATCAGGGTTGGAAGGAGCGCGAA 204674 Query 38070 ATTTACGGCAAGATTCGGTACATGAACTACAACGGATGTGTTAGGAAGTTTAATGTTAAC 38129 || | ||||| ||||| ||||||||||| | |||||| | || || ||||| ||| Sbjct 204673 ATCTTTGGCAAAATTCGATACATGAACTATGAAGGATGTAAGCGTAAATTCAATGTGAAC 204614 >seq2452 Length=1332465 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||||| |||||| || ||||||||| ||||||||||| | Sbjct 203865 ACCACCGCGCAGGCGAAGCACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGA 203924 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 || || | || |||| |||||||||||||| ||||| ||||| |||||| Sbjct 203925 CAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCC 203979 >seq147 Length=443619 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| | || ||||||||||||||||| || |||||||| ||||||||||| | Sbjct 111926 ACCTCCACGAAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGA 111867 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | | || || | || |||| ||||||||||| || || || ||||||||||| Sbjct 111866 GAGAGTG-CGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATC 111813 >seq890 Length=1089215 Score = 82.4 bits (90), Expect = 6e-11 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| || || |||||||| |||||| |||||||||||||| || || | Sbjct 230378 CCACCACGCAGACGGAGAACCAGATGGAGCGTGGATTCCTTCTGAATGTTATAGTCCGAA 230319 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | | || || | || |||| |||||||||||||| ||||| ||||||||||| Sbjct 230318 AGAGTG-CGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATC 230266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397049464823746