Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2452 125 2e-23 seq890 86.0 1e-11 >seq2452 Length=1332465 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | ||||| || || || ||||| || || |||| Sbjct 203866 CCACCGCGCAGGCGAAGCACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGAC 203925 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || || || ||||||||||||||| || Sbjct 203926 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGA 203985 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || ||||||||||| ||||| ||||| ||||| || | ||| | || || Sbjct 203986 ATTCCCTCCTTATCCTGGATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACC 204045 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || || || |||||||| |||||||| Sbjct 204046 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 204092 >seq890 Length=1089215 Score = 86.0 bits (94), Expect = 1e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||||| || || || ||||| || || || || ||||| || || | ||| | ||| Sbjct 223802 TGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTCTCAATCGTATCCGATGGTTC 223743 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || |||||||| ||||| ||||||||||| || ||||| ||||||||| || Sbjct 223742 GACCTCCAGCGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCATTTTG 223688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179613999417294