Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1391 158 1e-33 >seq1391 Length=279726 Score = 158 bits (174), Expect = 1e-33 Identities = 1044/1658 (63%), Gaps = 69/1658 (4%) Strand=Plus/Minus Query 93733 TTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCG 93792 || ||||| |||| ||||| | || ||||| | || | | || |||||| || Sbjct 3509 TTTAAAACCTTGGAACGATCGTATTTGCTGAAGATCAAGGGTAAGATTGTCGAGCGGCCA 3450 Query 93793 CACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCGAATGTTTTG 93852 || || |||||||||||||||||||||| || |||||| | ||||| ||| || Sbjct 3449 CAGCACATGCTGATGCGCGTCGCCATCGGTATCCACGGCGAAGACAT--CGA------TG 3398 Query 93853 CGGGCTTTCAGAG--ACA---TGCGGGACAAGAGGTAT---ACCATGGCCACCCCGACCC 93904 | | | | | ||| ||| | | || | || ||| || | |||||| Sbjct 3397 CAGCGATCGAAACGTACAATCTGCTGTCCGAGCGCTACTTCACCCATGCTTCACCGACCA 3338 Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964 |||| |||| || | | ||| ||| ||||||| ||||| ||| |||| || | Sbjct 3337 TGTTTGCGGCGGCCACGCAGCGGCCCCAGCTGTCTTCCTGTTTTCTGCTGAC---CATGT 3281 Query 93965 CCGACTCCA---TCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAAT 94021 |||| || || || || | ||| | |||||| | ||||| || || |||| Sbjct 3280 CCGATGACAGTATCGAGGGTATCTACGATACGCTCAAGCAGTGTGCCCTTATTTCCAAAT 3221 Query 94022 ACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCG 94081 || || || || || | | || ||| | | || || | ||| | ||||| | Sbjct 3220 CTGCCGGTGGTATTGGCCTGAACGTGCACTGCATCCGCGCGAAGGGAACGTACATATCTG 3161 Query 94082 GTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGC 94141 |||| || || | || ||||| || || || ||| | || || | |||||| |||| | Sbjct 3160 GTACGAACGGAATTTCAAACGGACTGGTGCCGATGTTGCGCGTGTACAACAATACGGCAC 3101 Query 94142 GCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCT 94201 | || || ||||||||||| | || || | ||||| ||||||||||||| | Sbjct 3100 GGTATGTCGACCAGGGTGGCAACAAACGGCCTGGAGCGTTCGCTATCTATCTCGAGCCGT 3041 Query 94202 GGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA 94261 |||||| || | | || |||| || || ||| |||||| || || | Sbjct 3040 GGCACGGAGATATATTCGAGTTTCTCGATCTTAAGAAAAACACCGGCAAAGAAGAGGTGC 2981 Query 94262 GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGA 94321 | ||| | ||| | || ||||| |||||| | || || || || ||||| || |||||| Sbjct 2980 GAGCCCGGGACATGTTTTACGCCCTCTGGATACCGGATCTGTTCATGAAGCGTGTCGAGG 2921 Query 94322 AAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTG 94381 ||| |||||||| | ||||| | || ||||||||| || |||| || ||| Sbjct 2920 CGAACGAAATGTGGAGTCTGATGTGTCCGCACGACTGTCCCGGATTGGCCGA--TTCGTG 2863 Query 94382 GATCG--CGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGG---GCAAGGCCAGGAA 94436 | || || || | |||| | | ||||| | ||| || | | Sbjct 2862 GGGCGAAGAGTTCGAGAAGCTGTACACGGGGTACGAGAAGGAGGGTCGCTTTATTCGACA 2803 Query 94437 GGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTAC 94496 ||| | || || ||| | || ||| | ||| | || ||||| || |||||| Sbjct 2802 GGTGAAGG-CGC-AGG-ACCTATGGTTTGCTATCATCGAGTCGCAGGTTGAAACGGGTGT 2746 Query 94497 GCCCTACATCTTGTTCAAGGACTC-TGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGG 94555 || ||||| ||| |||||| | ||| | || ||| ||| |||||| || | || Sbjct 2745 ACCGTACATGCTGTACAAGGATGCGTGTAATCG-TAAGAGCAATCAGCAGAACATTGGCA 2687 Query 94556 TGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTG 94615 |||||| | || || ||||||||||||||||| ||||| | || |||||| || | Sbjct 2686 CCATCAAGTGTTCCAACCTGTGCACCGAGATTGTGGAGTACTCGTCCAAGGACGAAATAG 2627 Query 94616 CTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTA 94675 | ||||| || || | ||| || ||| || ||||| | | | | ||| || Sbjct 2626 CGGTGTGCAATCTAGCCTCGATTGCGCTGAACATGTTCGTAAAGCAGGACAAAACG--TA 2569 Query 94676 CTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCTGA 94735 | || | | | ||| |||| | | || | | | | | || |||| Sbjct 2568 CGATTTTGCT-AAGCTGAAGGAAGTGGCCAAAATAGTGACACG---------CAATCTGA 2519 Query 94736 ACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGC 94795 ||| | || ||| |||| |||||| || |||||||| || ||| ||| || | Sbjct 2518 ACAAAATCATTGACGTTAACTACTACCCTGTGCCGGAGGCTAAGCGCTCCAACATGCGCC 2459 Query 94796 ATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGC 94855 | | |||||||||||||| || ||||| | || || ||| | | ||||||| | Sbjct 2458 ACAGACCCATCGGCATCGGTGTGCAGGGCATGGCCGATGCGTTCATCTTGATGCGCTATC 2399 Query 94856 CCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAAC------ATATTCGAAAGCATTT 94909 | ||||| || || || | || ||||| |||||||||| ||| | Sbjct 2398 CGTACGA------AAGCGAGGAGGCTCAAAAACTGAACCAACAGATATTCGAAACCATCT 2345 Query 94910 ATTACGGGGC-CATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 | || || || | ||| | | | | | | |||||| | ||| | || || ||||| Sbjct 2344 ACTATGGAGCGCTGGAAGCTAGCTG-CGAGTTGGCC-GCTCG--TGATGGACCGTACGAA 2289 Query 94969 TCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAA 95027 || | || || |||| | | | ||||| | |||| ||| | ||| | | Sbjct 2288 ACG-TACGAGGGCAGCCCGGTAAGCAAAGGCATCCTGCAGTACGAGATGTGGAACAAGGA 2230 Query 95028 GCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAA 95087 ||| || ||| | |||||| || | | | || || |||||| | Sbjct 2229 GCCTACGACTCTATGGAACTGGGCAGAGTTGAAGGAAAAGATTGCGAAGCACGGTATCCG 2170 Query 95088 AAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAA 95147 ||| || |||| |||| || ||||| ||||| || || || || ||||| ||||| || Sbjct 2169 CAACTCGTTGCTGTTGGCTCCGATGCCGACGGCTTCGACTGCCCAAATCCTCGGCAATAA 2110 Query 95148 CGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATT 95207 || |||||||| || | ||| || ||||| ||||||||||| ||||| | || || || Sbjct 2109 TGAATCGTTCGAGCCGTACACATCGAACGTTTACAACAGGCGCGTGCTGTCGGGCGAGTT 2050 Query 95208 CCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAA 95267 || || | ||| | || || || | ||| || || |||| |||||| | | | Sbjct 2049 CCAGGTGGTGAACCACCATCTGCTGCAGGATCTAACTAACATGGGCTTGTGGGATCTCGA 1990 Query 95268 GGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGA 95327 | |||||| || | || | ||| || || | || || || | |||||| | Sbjct 1989 CATGAAGAACGAAATTCTGTCCAACAATGGGTCGATTCAAAAGATAGAGGCTATACCGCA 1930 Query 95328 GGACATCAAGGCG--CTCTACAAGACCGTGTGGGAGAT 95363 ||| || | ||| || ||||| || || |||||||| Sbjct 1929 GGAAAT--ACGCGACCTGTACAAAACGGTCTGGGAGAT 1894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494706670061080