Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq2297 98.7 8e-16 seq2441 96.9 3e-15 >seq2297 Length=652487 Score = 98.7 bits (108), Expect = 8e-16 Identities = 171/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| ||||||| |||||| || || | ||| |||| | |||||||| Sbjct 539939 GCCGGGTTCGGGGTGACGGGCGGCGTTCACCGCCTCTGGTGCCACCGTTCGTACAAGGCG 539880 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| |||| | || || |||||||| || Sbjct 539879 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTCGATCGCCGGCCAGAACACGATT 539820 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG-ACGGCCGACCC 108518 | ||||| | || || | | |||||||||||||| || ||| |||| || || Sbjct 539819 TACGACTGGGTCCGGGACCATCGCATCCACCACAAGTACTCGGAAACGGACGGT-GATCC 539761 Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGA 108578 ||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | |||| | Sbjct 539760 ACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTACGCAAGCA 539701 Query 108579 CCCCGA 108584 ||| || Sbjct 539700 CCCGGA 539695 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 ||||| | ||||| ||||||||||||||||| ||||||||||| | ||||||||||| | Sbjct 537293 TGGCTATGGGCGAAGGATGGCACAACTACCATCACGTGTTCCCGTGGGACTACAAGGCAG 537234 Query 108941 CCGAGTTGGGGAACGACT 108958 ||||| |||| ||| ||| Sbjct 537233 CCGAGCTGGGCAACTACT 537216 Score = 89.7 bits (98), Expect = 4e-13 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 108889 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTG 108948 ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||| || Sbjct 533341 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCAGCCGAGATG 533282 Query 108949 GG 108950 || Sbjct 533281 GG 533280 >seq2441 Length=684802 Score = 96.9 bits (106), Expect = 3e-15 Identities = 167/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 108347 TCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCACCGCCC 108406 ||||| | |||||||||| || ||| | ||| | |||| ||||||||||| | | Sbjct 276090 TCGGTATCACGGCCGGCGCACACCGGCTCTGGTCGCACAGGGCCTACAAGGCGAAGTGGC 276149 Query 108407 CGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAGT 108466 || || | ||||||||| ||| || | || ||||||| | || ||| Sbjct 276150 CGCTCCGCGTGTTCCTGATGCTAGCGCAAACGCTAGCCTTCCAGAACAGCGTCTACGAGT 276209 Query 108467 GGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACG 108526 |||||| || || | || || ||||||| | | || || |||||||| ||||| | Sbjct 276210 GGGTGCGGGACCATCGCGTCCATCACAAGTTCACCGATACCGATGCCGACCCGCACAATG 276269 Query 108527 CCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACG 108586 | | | | || |||| ||||||||| | || ||||| ||| ||| ||| |||| |||| Sbjct 276270 CGACCCGCGGCTTCTTCTTCTCGCACATCGGCTGGCTGATGGTGAAGAAGCACCCGGACG 276329 Query 108587 TGA 108589 ||| Sbjct 276330 TGA 276332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381760362915912