Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1391 416 3e-111 seq2119 100 3e-16 seq2452 86.0 6e-12 >seq1391 Length=279726 Score = 416 bits (460), Expect = 3e-111 Identities = 1205/1831 (66%), Gaps = 34/1831 (2%) Strand=Plus/Plus Query 152712 GCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCG-CCACGAGTAATT 152770 || ||||| |||||||| || |||||||| ||||| | || || | ||| |||| Sbjct 1720 GCCGGCTTGGTGCGCAAGTAGTACATGCCAGTTTTCAATCC-CATCTTCCAACCGTAAAA 1778 Query 152771 GTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGGCT 152830 || ||||| |||| | | || | || | || ||| | || |||||||| Sbjct 1779 ATGGATCGACGTCAGCTTGCCATAGTTTGGCTCGGCGACGTGAATGTTGAACGATTGCGA 1838 Query 152831 CTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAAT-CATGCGTTTTG-CCTTCATC 152888 |||||| || || || || || || ||||| | || || |||||| || ||| Sbjct 1839 CTGATCGATAAACGCTCCCCGATCCGCTGCCATTTTGATGCA--CGTTTTCACCGATATC 1896 Query 152889 TCCCAGGCGGTTTTGTACAAAT----TTTTAACGCTATCCGGTATACCTTCAATGTTCTG 152944 |||||| | |||||||||| | | || | | ||||||| | || || || || Sbjct 1897 TCCCAGACCGTTTTGTACAGGTCGCGTATTTCC----TGCGGTATAGCCTCTATCTTTTG 1952 Query 152945 AATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGTACACGTTCAGTTT 153004 ||| || || |||| | | ||| |||| || ||| | ||| | || || Sbjct 1953 AATCGACCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAAGCCCATGTT 2012 Query 153005 AATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCT 153064 | | || || | | || | ||||| ||||| || |||||||||| || ||| || || Sbjct 2013 AGTTAGATCCTGCAGCAGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCT 2072 Query 153065 CAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGT 153124 || || || ||| | || || || ||||| |||||||| || ||||| || || Sbjct 2073 GTTGTAAACGTTCGATGTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGT 2132 Query 153125 GGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCG-AATGT 153183 | || |||||||| |||| || ||| || || || | |||||| ||| ||| | Sbjct 2133 CGAAGCCGTCGGCATCGGAGCCAACAGCAACGAGTTGCGGATACCGTGCT-TCGCAATCT 2191 Query 153184 CGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACT 153243 ||||||||| | ||| | ||| || | || || | ||||||||| ||||||| Sbjct 2192 TTTCCTTCAACTCTGCCCAGTTCCATAGAGTCGTAGGCTCCTTGTTCCACATCTCGTACT 2251 Query 153244 GTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGG 153303 | | | ||| || | || ||||| | |||| ||| || || || || Sbjct 2252 GCAGGATGCCTTTGCTTACCGGGCTGCCCTCGTACGTTTCGTACGGTCCATCACGAGCGG 2311 Query 153304 CCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGA 153363 ||| ||||||||||| || ||||| |||||||| ||||||||| || |||| || | Sbjct 2312 CCAACTCGCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCA 2371 Query 153364 GAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGAC 153423 | || || ||||| |||||||| ||||| || | || || ||||||| | Sbjct 2372 GTTTTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGC 2431 Query 153424 CCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGG 153483 |||| | ||||| ||||||||||| || | |||| |||| | || || | | Sbjct 2432 CCTGCACACCGATGCCGATGGGTCTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAG 2491 Query 153484 GATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCT 153543 | |||| || || || |||||||| || ||||| ||| | ||| | | ||| Sbjct 2492 GGTAGTAGTTAACGTCAATGATTTTGTTCAGATTGCGTGTCACTATTTTGGCCACTTCCT 2551 Query 153544 TAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAG 153603 | || || | ||||| || || || ||| |||| | |||| ||||| | Sbjct 2552 TCAGCTTAGCAAAATCGTACGT---TTTGTCCTGCTTTACGAACATGTTCAGCGCAATCG 2608 Query 153604 ACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGA 153663 | || ||||| || || || | || || | ||||| ||| ||||||| ||| | Sbjct 2609 AGGCTAGATTGCACACCGCTATTTCGTCCTTGGACGAGTACTCCACAATCTCGGTGCACA 2668 Query 153664 GGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTT 153723 ||||| || || ||| ||| | || ||||||||||| || ||||| ||||| || | Sbjct 2669 GGTTGGAACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCT 2728 Query 153724 TGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATA--AACCTATGCAG 153781 || | |||||||||||| | || || || || |||| |||| |||| || | || || Sbjct 2729 TGTACAGCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCAT--AG 2786 Query 153782 GTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCG 153841 ||||||||| |||| | | | |||| ||||| ||||||| | | |||||| Sbjct 2787 GTCCTGCGCCTTCACCTGTCGAATAAAGCGACCCTCCTTCTCGTACCCCGTGTACAGCTT 2846 Query 153842 CTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGA 153901 ||| ||||| ||||| | | ||||| | |||||||| | |||||||||||||| Sbjct 2847 CTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACT 2906 Query 153902 CCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACAT 153961 |||||| |||| || | ||| || ||||||||||||||| | |||||| ||||| | Sbjct 2907 CCACATTTCGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAA 2966 Query 153962 GAGGTCGCGCGCCTTGCA-ATCCTCCGCGCCCATGTTGCGTTTCAGATTGAG-CACGCTA 154019 | ||| || | || ||| || || ||| |||| || |||| ||| || | | Sbjct 2967 CATGTCCCG-GGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGA 3025 Query 154020 TAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACG---CTTTCCG 154076 | || || ||||||| || || | |||| || | || || || || || Sbjct 3026 -ATATATCTCCGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCA 3084 Query 154077 CCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTT 154136 ||||| ||||| | || || |||||||| | ||||||| ||| || |||| ||| || Sbjct 3085 CCCTGGTCGACATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTT 3144 Query 154137 GCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACG 154196 | | ||||| || | || | | || ||||| | |||||||| | | Sbjct 3145 GAAATTCCGTTCGTACCAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGG 3204 Query 154197 CCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCG 154256 ||||| || ||| | | || || || || || | ||||| |||||| || Sbjct 3205 CCAATACCACCGGCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCC 3264 Query 154257 TCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTT 154316 ||||| || || ||| | | |||| ||||| ||| ||| || || |||| Sbjct 3265 TCGATACTGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTG 3324 Query 154317 CCCGCCGAAAAGAGGGTGGGACTCGCGTGCGT-AAACAGTTTTTGGCTCATCATGCGGTA 154375 |||||| ||| | ||| || || || || || || | || || || ||| Sbjct 3325 GCCGCCGCAAACATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGG-ACAGCAGATTGTA 3383 Query 154376 CGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCAT 154435 ||||||||| || | ||||| || |||||||| || |||| ||||||||||| ||||| Sbjct 3384 CGTTTCGATCGCTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCAT 3443 Query 154436 GTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCAT-TTTCGAGGG 154494 |||||| || || ||| | | || | ||||||| | ||| | || ||| | || Sbjct 3444 GTGCTGTGGCCGCTCGACAATCTTACCCTTGATCTTCAGCAAATA-CGATCGTTCCAAGG 3502 Query 154495 TTTTGTAACCGAAATACTTGTATTCAAAATC 154525 |||| | |||||||| ||||| ||||||| Sbjct 3503 TTTTAAATCCGAAATAGTTGTACCCAAAATC 3533 >seq2119 Length=1501809 Score = 100 bits (110), Expect = 3e-16 Identities = 273/413 (66%), Gaps = 5/413 (1%) Strand=Plus/Minus Query 52327 TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCA 52386 |||||||||| || |||||| | |||||| |||| |||||| |||| | | |||| Sbjct 1235216 TGCCGTGCGTGAAGAAGAAGGCTGACTGGGCACTGAACTGGATCTCGAGCAAGAAGGCCA 1235157 Query 52387 CGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCT 52446 | | ||| || | ||||| || ||| || || || | || || || |||| Sbjct 1235156 ACTTTGGCGAACGGGTTGTGGCGTTTGCCGCCGTTGAAGGTATCTTCTTCAGTGGAAGCT 1235097 Query 52447 TTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACG 52506 | || | ||||| | | || | | ||| | ||||| || || || ||| |||| Sbjct 1235096 TCGCTTCAATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGACTCACCTTCTCGAACG 1235037 Query 52507 AGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGC 52566 || |||| |||||||||||||| || ||| |||||||| || || | |||| | Sbjct 1235036 AGCTGATTTCGCGCGACGAAGGGCTACACTGTGACTTTGCCTGTCTGATGTTCAAGTATC 1234977 Query 52567 GCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGAGCATGTTCAAGGAGGCGGTGGCT 52625 || | ||| | || ||| | || | ||| || || || || || | Sbjct 1234976 TGGT-TCAGAAGCCGTCGA--AGGAGCGCGTGACGGAG-ATTATCCGCGATGCTGTCGTG 1234921 Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685 ||||| |||||||| | ||| || ||||| || || |||| ||||||||| | Sbjct 1234920 ATCGAGCAGGAGTTTCTGACGAAGGCACTGCCCGTTGACATGCTCGGCATGAACTGTGAT 1234861 Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738 |||| |||||||||||||||||||||||||| || || | |||| || Sbjct 1234860 CTGATGTCGCAGTACATCGAGTTTGTGGCGGATCGTTTGCTGCTCGAGCTGGG 1234808 >seq2452 Length=1332465 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | || ||||| | | | |||||||| || |||||||| ||| | Sbjct 203866 CCACCGCGCAGGCGAAGCACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGAC 203925 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || |||| | | || ||||||||||| |||||||| Sbjct 203926 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGA 203985 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || || || ||| || || | | ||| | || || | | ||| ||| Sbjct 203986 ATTCCCTCCTTATCCTGGATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACC 204045 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || || ||||| || || |||||||| Sbjct 204046 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 204092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496245818632560