Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1391 199 4e-46 seq147 132 5e-26 >seq1391 Length=279726 Score = 199 bits (220), Expect = 4e-46 Identities = 946/1465 (65%), Gaps = 65/1465 (4%) Strand=Plus/Plus Query 146056 AGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTG 146115 |||| ||||| |||||||| |||||||| | || |||||||| || ||||| Sbjct 2029 AGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGAT 2088 Query 146116 GTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATG 146175 ||| ||||||||||||| || || || ||||| || || || |||| ||| || ||||| Sbjct 2089 GTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATC 2148 Query 146176 TACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGA 146234 |||| |||||| ||||| | | ||||| ||| | |||||||||| | | | Sbjct 2149 GGAGCCAACAGCAACGAGTTGCGGATACCGTG-CTTCGCAATCTTTTCCTTCAACTCTGC 2207 Query 146235 CCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCG 146294 ||| ||||| | || ||| || | | || | | ||||| |||| |||| Sbjct 2208 CCAGTTCCATA---GAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTT 2264 Query 146295 GAACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTC--GATCTTGGCCAGTTCGCAG 146352 | | ||||| |||||||| ||| || || || || || | ||||| |||||| Sbjct 2265 GCTTACCGGGCTGCCCTCGTACGTTTCGTACGGTCCATCACGAGC--GGCCAACTCGCAG 2322 Query 146353 CTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTG-GC 146411 ||||||||||| || | |||| ||||| || ||| | ||| | | | || || Sbjct 2323 CTAGCTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCA-GTTTTTGAGC 2381 Query 146412 CTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCC 146470 ||||||||| ||||| || ||| || | | | || || ||||| | ||||| | | Sbjct 2382 CTCCTCGCTTTCGTACGG-ATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACAC 2440 Query 146471 CGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCG-CAGTGGGATAGTGG 146529 ||| || | ||| | ||| | |||| | | ||| ||| || ||| |||| | Sbjct 2441 CGATGCCGATGGGTCTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGG-TAGTAG 2499 Query 146530 TTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCAGG 146589 || ||| ||||| ||||| ||||| || || ||||| | || |||||| Sbjct 2500 TTAACGTCAATGATTTTGTTCAGATTGCGTGTCACTATTTTGGCCACTTCCTTCAGCTTA 2559 Query 146590 ACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAG 146649 || | || | ||||| || | || ||| || |||| | || || ||||| | Sbjct 2560 GCAAAATCGTACGTTTT-GTCCTGC--TTTACGAACATGTTCAGCGCAATCGAGGCTAGA 2616 Query 146650 TTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTG 146709 || || || || | ||||||||| | |||| ||||||||||| ||| |||||| Sbjct 2617 TTGCACACCGCTATTTCGTCCTTGGACGAGTACTCCACAATCTCGGTGCACAGGTTGGAA 2676 Query 146710 CACTTGATGATGCCCAAAtttttttGGTTACTAAACTT---GTTGCAGGGGTCCTTGTAG 146766 ||||||||| |||| | || | || || || ||| || || | |||||||| Sbjct 2677 CACTTGATGGTGCCAATGTTCTGCTGATTGCT---CTTACGATTACACGCATCCTTGTAC 2733 Query 146767 AGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACAAATCT-CT 146825 |||||||||||| | || ||||| || | | ||||| ||| | | || || | | || Sbjct 2734 AGCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGAT--AGCAAACCATAGGTCCT 2791 Query 146826 G-GCCTTTACTTGTCTTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATATTTCAA 146884 | ||||| || |||| | | | ||| ||||| | ||||| | || | Sbjct 2792 GCGCCTTCACCTGTCGAATAAAGCGACCCTCCTTCTCGTACCCCGTGTACAGCTTCTCGA 2851 Query 146885 AACTAGAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATT 146944 | || || ||| | |||||| | | | ||||| | ||| ||| Sbjct 2852 ACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACA 2911 Query 146945 CTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGT 147004 || ||| ||| || || | ||| |||| ||| || ||||| ||| | | || || Sbjct 2912 TTTCGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGT 2971 Query 147005 CGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAG-TTGAGGACATCG--TAAA 147061 | || || | || || ||| |||| ||| ||| | ||| | ||| || | Sbjct 2972 CCCGGGCTCGCACCTCTTCTTTGCCGGTGTT-TTTCTTAAGATCGAGAAACTCGAATATA 3030 Query 147062 TTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGC-----GCCTTTTCGCTTACCGCC 147116 | |||| ||||| ||||| | || |||| || ||| ||| || || || Sbjct 3031 TCTCCG--TGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTT--GTTGCCACC 3086 Query 147117 CTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGGA 147176 ||| ||||| | || || | || ||| | || || ||||| | ||| || ||| || Sbjct 3087 CTGGTCGACATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGA 3146 Query 147177 TTTT---GTGGTGCC---GTTGTA------TTGAGCGCTGACGCTTTGCACGCTCAGCCC 147224 || | || || |||| | |||| || || |||||| |||| || Sbjct 3147 AATTCCGTTCGTACCAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGGCC 3206 Query 147225 GAGACCTCCGCCCAGA-TTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGT 147283 | ||| ||| |||| || ||||| | || ||| | | || | |||||| || | Sbjct 3207 AATACCACCG-GCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCT 3265 Query 147284 CGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGACGACACGTGC 147343 |||| ||||| || ||| |||| ||||| ||| ||| ||||| || |||| Sbjct 3266 CGATACTGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGG 3325 Query 147344 CCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAA--CGTGCCCAGACTCATCA-ATTGAT 147400 |||||||||||| || || || || ||||| | || | || || || |||| | Sbjct 3326 CCGCCGCAAACATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGA--CAGCAGATTG-T 3382 Query 147401 ACGTTTCAATGGCGCT-CAT-AACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAG 147458 ||||||| || |||| ||| | ||| |||||||| || | | |||||||||||| || Sbjct 3383 ACGTTTCGAT--CGCTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAG 3440 Query 147459 CATGTGCTGGGGTCGTTCCGCAATC 147483 ||||||||| || || || ||||| Sbjct 3441 CATGTGCTGTGGCCGCTCGACAATC 3465 >seq147 Length=443619 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | ||||| ||||| ||| | || || || || || || |||||||| Sbjct 111925 CCTCCACGAAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGAG 111866 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || ||| |||| | |||||||||||| || || Sbjct 111865 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGGGA 111806 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||||||| ||| || ||| | | |||| ||||||| | |||||| Sbjct 111805 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACC 111746 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || | || ||||| || |||||||| || |||||||||||| Sbjct 111745 TCGAGTGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCATG 111698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475484912329520