Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1391 260 1e-64 seq147 107 2e-18 >seq1391 Length=279726 Score = 260 bits (288), Expect = 1e-64 Identities = 939/1455 (65%), Gaps = 44/1455 (3%) Strand=Plus/Minus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAA--AACGGATATTTGaaaaaaaTCGAGGAAA 122898 ||||| ||||| |||| ||||| || ||| | || |||||| || ||| ||| | Sbjct 3524 TACAACTATTTCGGATTTAAAACCTTGGAACGATCG--TATTTGCTGAAGATCAAGGGTA 3467 Query 122899 AGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCG 122958 || | | ||| || || || ||||| ||||||||||| || || | ||||| | Sbjct 3466 AGATTGTCGAGCGGCCACAGCACATGCTGATGCGCGTCGCCATCGGTATCCACGGCGAAG 3407 Query 122959 ACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGA 123018 ||||||| |||| |||||| ||| || || |||| | | ||||| || || Sbjct 3406 ACATCGATGCAGCGATCGAAACGTACAATCTGCTGTCCGAGCGCTACTTCACCCATGCTT 3347 Query 123019 GTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCA 123078 || || |||| || || | |||| || ||| ||| ||||||| |||||| |||| | Sbjct 3346 CACCGACCATGTTTGCGGCGGCCACGCAGCGGCCCCAGCTGTCTTCCTGTTTTCTGCTGA 3287 Query 123079 CCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTT 123138 || || ||| ||||| ||| |||||||| || || | | || || | |||| Sbjct 3286 CCATGTCCGATGACAGTATCGAGGGTATCTACGATACGCTCAAGCAGTGTGCCCTTATTT 3227 Query 123139 CCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCA 123198 |||||| || ||| || || ||| ||||||||||| | | | | |||| || Sbjct 3226 CCAAATCTGCCGGTGGTATTGGCCTGAACGTGCACTGCATCCGCGCGAAGGGAACGTACA 3167 Query 123199 TCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACG 123258 | | || ||||||| | ||| || | | ||| |||| || ||||| || Sbjct 3166 TATCTGGTACGAACGGAATTTCAAACGGACTGGTGCCGATGTTGCGCGTGTACAACAATA 3107 Query 123259 CCGTGCGGCACGTCGACCAGGGCGGCAA---ACGCAAAGGCGCGATGGCGATCTATCTAG 123315 | | ||| | ||||||||||| ||||| ||| || ||| | || |||||||| | Sbjct 3106 CGGCACGGTATGTCGACCAGGGTGGCAACAAACGGCCTGGAGCGTTCGCTATCTATCTCG 3047 Query 123316 AACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAG 123375 | |||||||||| ||| | | ||| ||| | || | || |||| || |||| Sbjct 3046 AGCCGTGGCACGGAGATATATTCGAGTTTCTCGATCTTAAGAAAAACACCGGCAAAGAAG 2987 Query 123376 AAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCG 123435 | | |||||| || |||| ||||| | ||| |||| ||| |||| ||| || | Sbjct 2986 AGGTGCGAGCCCGGGACATGTTTTACGCCCTCTGGATACCGGATCTGTTCATGAAGCGTG 2927 Query 123436 TAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGACG 123495 | | | ||| ||||| || |||||||| | |||||||| ||| ||| Sbjct 2926 TCGAGGCGAACGAAATGTGGAGTCTGATGTGTCCGCACGACTGTCCCGGATTGGCCGATT 2867 Query 123496 TTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTA 123555 | ||| | |||| || || ||||| || |||||| || || || Sbjct 2866 CGTGGGGCGAAGAGTTCGAGAAGCTGTACACGGGGTACGAGAAGGAGGGTCGCTTTATTC 2807 Query 123556 GTCAGGTTCCGGCACGTGA--TTTGTTCAAATT--TATTATCGAAACACAAGTCGAAACC 123611 | ||||| ||| | || | || | || ||| ||||| | || || ||||| Sbjct 2806 GACAGGTGAAGGCGCAGGACCTATGGT----TTGCTATCATCGAGTCGCAGGTTGAAACG 2751 Query 123612 GGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTG 123671 || ||||||||||| ||||| || || || || | || | ||||||| ||| | Sbjct 2750 GGTGTACCGTACATGCTGTACAAGGATGCGTGTAATCGTAAGAGCAATCAGCAGAACATT 2691 Query 123672 GGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAG--CGATGCCGATC 123729 || || || || ||| || || ||| |||| ||| | || ||| | | | || Sbjct 2690 GGCACCATCAAGTGTTCCAACCTGTGCACCGAGATTGTGGAGTACTCGTCCAAG--GACG 2633 Query 123730 AAGTGGCCGTGTGTAATTTGGCTTCGATTTGCG-TGAA-----TCGTTGCGTCG---AAA 123780 || | || ||||| ||| | || |||||| ||| |||| |||| | | ||| Sbjct 2632 AAATAGCGGTGTGCAATCTAGCCTCGATT-GCGCTGAACATGTTCGTAAAGCAGGACAAA 2574 Query 123781 ACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGA 123840 ||| | | ||| | || ||| || | | |||| || | ||| ||| Sbjct 2573 ACG----TACGATTTTGCTAA-GCTGAAGGAAGTGGCCAAAATAGTGACACGCAATCTGA 2519 Query 123841 ACAAAATTATCGATGTTAATTTTTATCCTTTG---GAGG--AAGCGCGTTTGTCTAATTT 123895 ||||||| || || ||||| | || ||| || |||| |||||| || || | Sbjct 2518 ACAAAATCATTGACGTTAACTACTACCCTGTGCCGGAGGCTAAGCGC-----TCCAACAT 2464 Query 123896 GAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCG 123955 | |||||||| |||| | || | || || ||||||| ||||| | || |||| Sbjct 2463 GCGCCACAGACCCATCGGCATCGGTGTGCAGGGCATGGCCGATGCGTTCATCTTGATGCG 2404 Query 123956 CATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTA 124015 | |||||||||||||| || || | || || || ||| |||||| || || Sbjct 2403 CTATCCGTACGAAAGCGAGGAGGCTCAAAAACTGAACCAACAGATATTCGAAACCATCTA 2344 Query 124016 TTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTA 124075 || || || |||| || |||||||| | || | | || ||||||||| || Sbjct 2343 CTATGGAGCGCTGGAAGCTAGCTGCGAGTTGGCCGCTCGTGATGGACCGTACGAAACGTA 2284 Query 124076 CGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGAC 124135 || ||||||||||| ||| ||| || |||||||||| |||||||| || || Sbjct 2283 CGAGGGCAGCCCGGTAAGCAAAGGCATCCTGCAGTACGAGATGTGGAACAAGGAGCCTAC 2224 Query 124136 AAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTC 124195 | | | ||| ||||| | || || || || ||| ||||||| | || ||||| Sbjct 2223 GACTCTATGGAACTGGGCAGAGTTGAAGGAAAAGATTGCGAAGCACGGTATCCGCAACTC 2164 Query 124196 GCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATC 124255 | || || |||| ||||||||||| | ||||| ||||| | || || || ||||| Sbjct 2163 GTTGCTGTTGGCTCCGATGCCGACGGCTTCGACTGCCCAAATCCTCGGCAATAATGAATC 2104 Query 124256 CTTCGAGCCGTTCAC 124270 |||||||||| ||| Sbjct 2103 GTTCGAGCCGTACAC 2089 >seq147 Length=443619 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| || || | || ||| ||||| || || |||||||| ||||| || ||||| | Sbjct 111925 CCTCCACGAAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGAG 111866 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | ||| |||| || || || ||| | || | ||| ||||| || || ||| Sbjct 111865 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGGGA 111806 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 |||||||| || || || || || || | || | ||||| |||| |||||| Sbjct 111805 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACC 111746 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | || ||||| || |||||||| || ||||| ||||| Sbjct 111745 TCGAGTGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 111699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451988097443080