Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2119 176 7e-39 seq1391 170 3e-37 >seq2119 Length=1501809 Score = 176 bits (194), Expect = 7e-39 Identities = 297/424 (70%), Gaps = 7/424 (2%) Strand=Plus/Plus Query 159745 CAGCAACCTGTCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCA 159803 |||||| | || |||||||| |||||||| || | ||||| | |||||||| || || | Sbjct 1234819 CAGCAAACGATCCGCCACAAACTCGATGTA-CTGCGACATCAGATCACAGTTCATGCCGA 1234877 Query 159804 GCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCA 159863 ||| |||||| || || | || ||||||||||| ||| ||| |||| || ||| | Sbjct 1234878 GCATGTCAACGGGCAGTGCCTTCGTCAGAAACTCCTGCTCGATCACGACAGCATCGCGGA 1234937 Query 159864 CAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 ||||| || || || || | | |||||| | || | | ||| |||| || | Sbjct 1234938 TAATCTCCGTCACGCGCTCCTTCGACGGCTT---CTGAACCAGATACTTGAACATCAGAC 1234994 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 | |||||||| ||||| || || ||||| || || || | |||||| || | | |||| | Sbjct 1234995 AGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTC 1235054 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 | ||||| | |||||| || ||||| || || | || || || || || |||| Sbjct 1235055 CAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTTCCACTGAAGAAGA 1235114 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103 | || || ||||| ||||||||||| | || || ||||| ||| || || | Sbjct 1235115 TACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGCCTTCTTGCTCGAGA 1235174 Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCG-CTCGACGGCGTTA 160162 |||| | ||||| ||||||||||| | |||||||| ||| |||| ||||||| Sbjct 1235175 TCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCA-GCGTTTCGATGGCGTTA 1235233 Query 160163 AACA 160166 |||| Sbjct 1235234 AACA 1235237 Score = 105 bits (116), Expect = 1e-17 Identities = 130/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 160205 ATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAA 160264 |||||| ||||||||| || |||||||||||| || || ||||| ||| |||||| Sbjct 1235348 ATCAGCAGCGAGTACATCTCGCTGTGCACATTTTCCATCGCAATCTGGAAGCCGTAGAAG 1235407 Query 160265 TATGTCGCCTCCAGATA-CTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAAC 160323 | ||||||| | || |||||||||||| |||| | || ||||||| | || || Sbjct 1235408 CAGCGCGCCTCC-GTTACCTGCACCTCCTGGCTGAAGCGTTCCACCAGATTTTCGTTCAC 1235466 Query 160324 CAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCG 160378 | || |||| || |||||||| || | |||||||||||| || || | |||| Sbjct 1235467 GATGCCATCGGACGCAGCAAAGAAGGCAAGCACGTGAGAGATAAAGTGACGCTCG 1235521 >seq1391 Length=279726 Score = 170 bits (188), Expect = 3e-37 Identities = 403/607 (66%), Gaps = 4/607 (1%) Strand=Plus/Plus Query 203834 TTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTAC 203893 ||||| ||||||||||| || || || || ||||| || ||| || | | || |||||| Sbjct 1684 TTCGTTTTGTCCACCGTAAATTGGATCGCATTCACAGCCGGCTTGGTGCGCAAGTAGTAC 1743 Query 203894 ATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACG 203953 ||||| || || | ||| ||| ||| ||||| | || || || | ||| |||| | Sbjct 1744 ATGCCAGTTTTCAATCCCATCTTCCAACCGTAAAAATGGATCGACGTCAGCTTGCCATAG 1803 Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCT 204013 || || ||||| | ||||||||| | || || || ||||| || | ||||||| Sbjct 1804 TTTGGCTCGGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCTCCCCGATCC 1863 Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073 || ||||| ||||| || ||| ||| |||||||| ||||| ||| ||| ||| | Sbjct 1864 GCTGCCATTTTGATGCACGTTTTCACCGATATCTCCCAGACCGTTTTGTACAGGTCGCGT 1923 Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 | | || || | | | || | | ||||| || |||| || || | | || Sbjct 1924 ATTTCCTGCGGTATAGCCTCTATCTTTTGAATCGACCCATTGTTGGACAGAATTTCGTTC 1983 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | || |||||| ||||| | | || ||| ||| ||| ||| |||| | Sbjct 1984 TTCATGTCGAGATCCCACAAGCCCATGTTAGTTAGATCCTGCAGCAGATGGTGGTTCACC 2043 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || |||||||| | | | || | | ||| ||| | || |||||| Sbjct 2044 ACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATGTGTACGGCTCGAAC 2103 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 | || || ||||||| || || || || ||||| ||||| ||||||| |||| Sbjct 2104 GATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCGGAGCCAACAGCAAC 2163 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCAT--CG 204371 |||||||| | ||||| || | | | ||||| | ||||| | ||| | Sbjct 2164 GAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGCCCAGT--TCCATAGAG 2221 Query 204372 CACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431 | || | | | |||||| ||| |||| | |||||||| || || |||||||||| Sbjct 2222 TCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCTTACCGGGCTGCCCT 2281 Query 204432 TGTACGT 204438 |||||| Sbjct 2282 CGTACGT 2288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795128631876880