Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2119 205 9e-48 seq147 138 1e-27 seq2452 136 4e-27 >seq2119 Length=1501809 Score = 205 bits (226), Expect = 9e-48 Identities = 302/428 (71%), Gaps = 0/428 (0%) Strand=Plus/Plus Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 ||| |||| |||| | || ||||| ||||||||||| |||||||| || || || Sbjct 1234810 CAGCTCGAGCAGCAAACGATCCGCCACAAACTCGATGTACTGCGACATCAGATCACAGTT 1234869 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830 | || |||| || ||||| || | || ||||| |||||||| |||| || Sbjct 1234870 CATGCCGAGCATGTCAACGGGCAGTGCCTTCGTCAGAAACTCCTGCTCGATCACGACAGC 1234929 Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACAT 132890 ||| || || ||| | |||||| || |||| || |||| || ||||||||| Sbjct 1234930 ATCGCGGATAATCTCCGTCACGCGCTCCTTCGACGGCTTCTGAACCAGATACTTGAACAT 1234989 Query 132891 CAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGT 132950 || || |||||||| || || | || ||||| | ||||| || ||||| ||| || Sbjct 1234990 CAGACAGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGT 1235049 Query 132951 CAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAA 133010 | || ||||| ||||| || || || ||||| || || | ||||| || || || Sbjct 1235050 GAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTTCCACTGAA 1235109 Query 133011 GAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCT 133070 ||||| || || ||||| || || ||||| | || ||||| || |||| | ||||| Sbjct 1235110 GAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGCCTTCTTGCT 1235169 Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130 | ||||||| ||| ||||| || ||||| | || |||||||||| |||||||||||| Sbjct 1235170 CGAGATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGC 1235229 Query 133131 GTTCAACA 133138 ||| |||| Sbjct 1235230 GTTAAACA 1235237 Score = 163 bits (180), Expect = 3e-35 Identities = 195/262 (74%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||| || ||| ||||| || ||| || || ||||| || || || || Sbjct 1235338 GTACGTGTCGATCAGCAGCGAGTACATCTCGCTGTGCACATTTTCCATCGCAATCTGGAA 1235397 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| |||||||| |||||||| || || ||| || || |||||||| Sbjct 1235398 GCCGTAGAAGCAGCGCGCCTCCGTTACCTGCACCTCCTGGCTGAAGCGTTCCACCAGATT 1235457 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||| |||||||| ||| || || || ||||| |||||||| ||| || || || Sbjct 1235458 TTCGTTCACGATGCCATCGGACGCAGCAAAGAAGGCAAGCACGTGAGAGATAAAGTGACG 1235517 Query 133347 CTCGTTGTCGTTCAAGCGC-TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGA 133405 |||| | ||| ||||| ||||| || | | ||||||||||| || |||||||| | Sbjct 1235518 CTCGCT-CGGTTTCAGCGCATCCCAATCCTTCATATCCTTGGACAGATCGACCTCCTCCA 1235576 Query 133406 CGGTCCAAAACGACGCCTCGGC 133427 | ||||| ||||| || || || Sbjct 1235577 CCGTCCAGAACGAAGCTTCCGC 1235598 >seq147 Length=443619 Score = 138 bits (152), Expect = 1e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| || || ||||| |||||||| |||| |||||| | Sbjct 111695 AAACATGCAGATTTTCGTGAAAACTCTTACTGGCAAGACCATCACACTCGAGGTCGAGCC 111754 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | | || | || |||| ||||| || || |||||| | || Sbjct 111755 TTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGA 111814 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| ||||| | ||| ||||| |||||||| || | ||||| ||| || || Sbjct 111815 TCAGCAGCGACTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCTGATTA 111874 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| |||||| |||| || ||| |||||||||| Sbjct 111875 CAACATCCAGAAGGAATCGACCCTTCATCTGGTGCTGCG 111913 >seq2452 Length=1332465 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| |||||||| || ||||| ||| | || |||||| || Sbjct 204095 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 204036 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || | | ||| | || | || |||| || || ||||||||||| | || Sbjct 204035 TCGGATACGATCGAAAATGTGAAGGCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGAT 203976 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||||| || |||| || ||||| |||||||| || | ||||| || ||| ||| Sbjct 203975 CAACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGTCCGATTAC 203916 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||| ||||| |||| || ||||||||||| || Sbjct 203915 AACATCCAGAAGGAGTCGACCCTTCATTTGGTGCTTCG 203878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500156087976320