Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq546 105 5e-17 >seq546 Length=386175 Score = 105 bits (116), Expect = 5e-17 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 870800 ATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCA 870859 || || |||| ||| || || ||| | || || ||||||||| |||| ||||| | || Sbjct 11748 ATCGTAGATTTTTCGTCGCCTAATGTAGCGAAGGAAATGCATGTTGGTCATTTGCGTTCG 11807 Query 870860 ACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGT 870919 |||||||||||||| || |||||| | | || || || ||||||||| || Sbjct 11808 ACTATTATTGGTGATTCGATTTGTCGATTTTTGGAGTACCTCGGGCACGATGTTCTGCGC 11867 Query 870920 ATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 870970 || ||||| | || || |||||||| ||||| || |||||||||||| || Sbjct 11868 ATCAATCACATCGGCGACTGGGGAACGCAATTTGGCATGTTAATTGCTCAT 11918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780689756935138