Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2523 122 1e-22 seq1391 105 8e-18 seq2119 95.1 1e-14 seq2011 84.2 3e-11 >seq2523 Length=22734 Score = 122 bits (134), Expect = 1e-22 Identities = 253/364 (70%), Gaps = 12/364 (3%) Strand=Plus/Minus Query 167357 AACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAA 167416 |||| ||||| |||||||| | |||||| |||| |||||||||| | |||| || Sbjct 18427 AACCGGTACCGATACCTTCCGCACCGTTGACCAGCACCATCGGTATGATCGGCAGATACC 18368 Query 167417 AGTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGT-TGAGAATGGCATCATCTTTG 167475 || | ||||| ||| || ||||| || ||| | | | | ||| ||| || Sbjct 18367 AGACAGGTTCGATGCGCAGATTGTCATCGACCTGGTACTCTAACAGTGG-ATCGTCCAGC 18309 Query 167476 GGATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCGT-CTGAGA 167534 |||| ||||| | ||| | | || |||| | || ||||||||||| | ||| Sbjct 18308 GGATGGAAGATGTGTCGCGTCAGGGCGGAAAGCATTGTGAAGATGTACCTAGGACTGG-- 18251 Query 167535 CGCA-TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGA 167593 ||| |||||||| ||| | ||||| ||||| || ||||||| || | || ||||||| Sbjct 18250 CGCTGTCCTTGCCGCCCGTCAGGCGCGTACCGAACTGACCACCCGGATACAGCAGATTGA 18191 Query 167594 TGTTATT-CGACCC-CGTATAATCGTTGGCCAACTTGACGATCGTTTCAGC-GAGGGAAA 167650 |||| || | ||| |||| || | |||| |||||||||| | ||| ||| || | Sbjct 18190 TGTTGTTGCTACCAACGTA--ATTCTGCGCCAGGTTGACGATCG-TGGAGCAGAGCGACA 18134 Query 167651 CTTCGCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCA 167710 | || ||||| ||||| || |||||| ||||| | |||||| ||| || ||||| | Sbjct 18133 CCTCACCGTGATGGTAGGCGGACTTTTCCGCCACCGAACCTGCCAGCTGGGCCACCTTTA 18074 Query 167711 TCTC 167714 ||| Sbjct 18073 CCTC 18070 Score = 82.4 bits (90), Expect = 9e-11 Identities = 126/177 (71%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 168428 ACTTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGA 168487 ||||||| || || ||||| || || || || | ||| || || || || | | Sbjct 17314 ACTTACCGCGCAGCGGAAACACACCGTACGTGTCACGACCGACCACACCCAGCCCGGACA 17255 Query 168488 CAGCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTG 168547 | ||||| ||||| ||||| || ||||| || | |||||| ||||| || || | || Sbjct 17254 CGGCGAGCGTTTTGGCTGAGTCTCCCTCGGTAAGGATGAGCGTACAGTTGAGCGAAT-TG 17196 Query 168548 C-CGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACCAGTGATCTTAGACTTT 168603 | || ||| || | ||| || || |||| ||||||||||| ||||||| |||||| Sbjct 17195 CGCGAACCGGCATCGTTGGCGTCCTCCAGCTTGGGGATACCCTTGATCTTGGACTTT 17139 >seq1391 Length=279726 Score = 105 bits (116), Expect = 8e-18 Identities = 730/1165 (63%), Gaps = 22/1165 (2%) Strand=Plus/Plus Query 109972 TCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATA 110031 ||||||| || ||| ||||||||||| | ||| || || || ||| || || Sbjct 2290 TCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAGCTTCCAGCGCTCCATAGTAGATG 2349 Query 110032 GTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGA-AGACCACA 110090 || || || || || |||| ||| ||| || | ||| | ||| || || Sbjct 2350 GTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATC 2409 Query 110091 AAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTT 110150 |||| | ||| |||| || | ||||| ||||||| || ||||| | || |||||| Sbjct 2410 AAGA-TGAACGCATCGGCCATGCCCTGCACACCGATGCCGATGGGTCTGTGGCGCATGTT 2468 Query 110151 AGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTT 110210 ||||| ||| || ||||| |||| ||| |||| || ||||| Sbjct 2469 GGAGCGCTTAGCCTCCGGCACAGGGTAGTAGTTAACGTCAATGATTTTGTTCAGATTGCG 2528 Query 110211 CGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATT 110270 ||||| | || | | ||| | || || | ||||| ||||||| |||| || Sbjct 2529 TGTCACTATTTTGGCCACTTCCTTCAGCTTAGCAAAATCGTACGTTTTG---TCCTGCTT 2585 Query 110271 GACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGT 110330 || | || || ||||| || || ||||||||||| | | ||||| ||| | Sbjct 2586 TACGAACATGTTCAGCGCAATCGAGGCTAGATTGCACACCGCTATTTCGTCCTTGGACGA 2645 Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390 ||| |||| ||| || || |||| |||||||| ||| ||| || | ||||| |||||| Sbjct 2646 GTACTCCACAATCTCGGTGCACAGGTTGGAACACTTGATGGTGCCAATGTTCTGCTGATT 2705 Query 110391 -CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449 | || || || || |||||||| || |||||||| || ||| ||||| ||| | Sbjct 2706 GCTCTTACGA-TTACACGCATCCTTGTACAGCATGTACGGTACACCCGTTTCAACCTGCG 2764 Query 110450 ACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTG-CG-TTAGCGAGACCTTC 110507 ||| || || || ||||| || | ||| || || || || | |||| || Sbjct 2765 ACTCGATGATAGCAAACCATAGGTC--CTGCGCCTTCACCTGTCGAATAAAGCGACCCTC 2822 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 || ||||||| ||||||| | ||| || || | || || ||| | | || Sbjct 2823 CTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGG 2882 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627 | || ||||| | || ||| || | | |||| || | |||||||||||| Sbjct 2883 ACAGTCGTGCGGACACATCAGACTCCACATTTCGTTCGCCTCGACACGCTTCATGAACAG 2942 Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687 || || ||||| | || | || | ||| ||| || ||||||| | || ||| Sbjct 2943 ATCCGGTATCCAGAGGGCGTAAAACATGTCCCGGGCTCGCACCTCTTCTTTGCCGGTGTT 3002 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 || || | ||| || | ||||| |||||| || |||||||||| ||||| Sbjct 3003 TTTCTTAAGATCGAGAAACTCGAATATATCTCCGTGCCACGGCTCGAGATAGATAGCGAA 3062 Query 110748 GGATC----CCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCC 110803 | || || | | | || |||||| ||||| ||||| || ||| | || | Sbjct 3063 CGCTCCAGGCCGTTTGTTG-CCACCCTGGTCGACATACCGTGCCGTATTGTTGTACACGC 3121 Query 110804 TGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT---AT 110860 | ||| || | | ||| | || || || ||||| | | || || | | Sbjct 3122 GCAACATCGGCACCAGTCCGTTTGAAATTCCGTTCGTACC---AGATATGTACGTTCCCT 3178 Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 | || || ||| ||| | | || ||||||||||| || | || ||| | |||| Sbjct 3179 TCGCGCGGATGCAGTGCACGTTCAGGCCAATACCACCGGCAGATTTGGAAATAAGGGCAC 3238 Query 110921 ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGC 110980 ||| |||| ||| | || ||||| || || || | ||| | ||||| | Sbjct 3239 ACTGCTTGAGCGTATCGTAGATACCCTCGATACTGTCATCGGACATGGTCAGCAGAAAAC 3298 Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040 | ||||||| ||| || || |||| |||| || | || |||| ||||| ||| Sbjct 3299 AGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCGCAAACATGGTCGGTGAAGCATGGGTGA 3358 Query 111041 ACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAA 111100 | | | ||||| | ||||| || |||| || | | |||| ||||| | Sbjct 3359 AGTAGCGCTCGGACAGCAGATTGTACGTTTCGATCGCTGCATCGATGTCTTCGCCGTGGA 3418 Query 111101 TACCAATGGCAACTCGCATGAACAT 111125 |||| ||||| || ||||| | ||| Sbjct 3419 TACCGATGGCGACGCGCATCAGCAT 3443 >seq2119 Length=1501809 Score = 95.1 bits (104), Expect = 1e-14 Identities = 321/491 (65%), Gaps = 7/491 (1%) Strand=Plus/Minus Query 11483 GGAG-AGTCACCTGAATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGA 11541 |||| || ||| | ||||| ||||||||||| || || || | || || | || ||| Sbjct 58377 GGAGCAGGCACATAAATCTGTCGATCGAAACGCCCAGGTCGCAACAGTGCCTTGTCGAGA 58318 Query 11542 ATATCGACACGGTTTGTAGCGGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCC 11601 || || || ||||| || || || | || || | | ||| ||| ||| |||||| Sbjct 58317 ATGTCCACCCGGTTGGTGGCTGCCAGCACGACCACGTTCGTCGTCGTGTTGAACCCGTCC 58258 Query 11602 ATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCT 11661 || || || |||||||||| || | ||| | || | ||| | | | | | | Sbjct 58257 ATCTCCACCAGCAGCTGGTTGAGTGTGTTTTCCTGTTCCGAG-TGGCCGCCGAAGCTCTT 58199 Query 11662 GCC-GAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTT 11720 ||| |||||| || || || || || || |||||||| | || |||||| ||| Sbjct 58198 GCCACCACGCTTTCGTCCTACCGCATCGATTTCGTCGATGAAGAGAATGCACGGTGCGTT 58139 Query 11721 GGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTC 11780 || ||| |||| | || || |||||| || ||| || || || ||||| || Sbjct 58138 TTTGCGCGCCATCGCGAACATGTCGCGCACACGCGACGGTCCCACGCCAACAAACATTTC 58079 Query 11781 AACGAAGTTTGCGGCAGAACACTG-AATGAAGGGAACATTAGACTCACCAGCGATGGCTC 11839 | || | | | ||| || | |||||| || || || | ||||| || |||| Sbjct 58078 CAAAAACTCCGAACCGGAA-ACGGTAATGAACGGCACGTTTGCTTCACCTGCCGTGGCCT 58020 Query 11840 GAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCT 11899 ||||| || || || |||||||| || | ||| | || | || || |||||| | Sbjct 58019 TTGCGAGTAGCGTTTTGCCCGTACCCGGGGGACCGGTCAGCATAGCTCCCTTGGGGATTT 57960 Query 11900 TGGCACC-ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGT 11958 | ||||| | || | | || ||| ||| || || ||||||| |||| |||| || | Sbjct 57959 TCGCACCGAGATCGATA-TATTGCTGAGGGTTTTTCAGGAAGTTTACAAACTCCATAATT 57901 Query 11959 TCCTCCTTGGC 11969 || |||||| Sbjct 57900 TCAATCTTGGC 57890 >seq2011 Length=138812 Score = 84.2 bits (92), Expect = 3e-11 Identities = 124/174 (71%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 158472 AGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGT 158531 ||| || ||||| || || || || ||||| ||| |||| |||||| ||| |||| | || Sbjct 11643 AGGCTGCTATGGCCGGGTAGCTCCCCGTTCTGGTCTGGCAGTGAAGAACTTTATCGATGT 11584 Query 158532 TGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCA 158591 ||||| || ||| |||| || || ||| | ||| || || || ||||| || Sbjct 11583 CGGTGCCGGTGTCGTCGACGAGGACTACCGTGGTAACGTCGGCGTTGTGCTGTTCAACCA 11524 Query 158592 T--GGAGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTT 158643 |||||| ||| || || || ||||| || || |||||||||||| || || Sbjct 11523 CTCGGAGAC--GGATTTCGAAGTGAAGAAAGGAGACCGCATCGCACAGTTTATT 11472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588956320839400