Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq147 141 2e-28 seq890 87.8 4e-12 >seq147 Length=443619 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| || || || ||||| || || || || || || |||||||| | ||||| | Sbjct 111916 AGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGA 111857 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || |||||||| || |||||||| ||||| || || ||||| ||||||||||| Sbjct 111856 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGGGAATGCCTTCC 111797 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||| || ||||| || ||||||||| || || || || || Sbjct 111796 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCGAGTGTG 111737 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | |||||| ||||| | ||||| Sbjct 111736 ATGGTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 111699 >seq890 Length=1089215 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 195027 TGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT 195086 ||| || ||||| || ||||| ||||| || ||||||||||||||| || ||||| Sbjct 223805 TGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTCTCAATCGTATCCGATGG 223746 Query 195087 TTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||| || || || || | |||||||| |||| |||||| ||||| | ||||||| Sbjct 223745 TTCGACCTCCAGCGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCATTT 223690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109443602682191