Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2452 89.7 3e-13 seq890 89.7 3e-13 >seq2452 Length=1332465 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| || || ||||| ||||| || || || || | || |||| ||| Sbjct 203884 ACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGCGTGCGACCATCCTCC 203943 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || || || || || | || | |||||||| || Sbjct 203944 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTATCCTGG 204003 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| || || | | |||| || || ||| || || | ||| ||||| || Sbjct 204004 ATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTA 204063 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||||||| || || || ||||||||||| || Sbjct 204064 CCCGTGAGGGTTTTGACGAAGATCTGCATCTT 204095 >seq890 Length=1089215 Score = 89.7 bits (98), Expect = 3e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| || | ||| ||| ||||||||||||||||||||||| | || |||| || Sbjct 230361 AACCAGATGGAGCGTGGATTCCTTCTGAATGTTATAGTCCGAAAGAGTGCGACCATCCTC 230302 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 |||||| || |||||||| || || || ||||| ||| | || | |||||||| Sbjct 230301 CAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATGCCCTCCTT 230248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324623024350344