Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2119 123 3e-23 >seq2119 Length=1501809 Score = 123 bits (136), Expect = 3e-23 Identities = 185/263 (70%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 18943 AGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAAT 19002 |||| || ||||||| ||| ||||| ||||| ||||| || ||||| | |||| Sbjct 1234976 AGATACTTGAACATCAGACAGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGC 1235035 Query 19003 TCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA 19062 || || || || || | ||||||||||| || | || || | |||||| || ||||| Sbjct 1235036 TCGTTCGAGAAGGTGAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCG 1235095 Query 19063 AATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAA 19122 || |||| ||||| |||||||| || || ||||| || || | | ||| ||| | Sbjct 1235096 AAGCTTCCACTGAAGAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAG 1235155 Query 19123 CTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGC 19182 | || | || | ||||| ||||||||||| ||||||||||| || || || ||| Sbjct 1235156 TTGGCCTTCTTGCTCGAGATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGC 1235215 Query 19183 ATTGTCTCTATAGAATTAAATAG 19205 | || || || | ||||| || Sbjct 1235216 AGCGTTTCGATGGCGTTAAACAG 1235238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562090018539720