Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1669 131 1e-25 seq147 114 1e-20 seq2452 111 1e-19 >seq1669 Length=235595 Score = 131 bits (144), Expect = 1e-25 Identities = 210/302 (70%), Gaps = 0/302 (0%) Strand=Plus/Plus Query 13651 ATTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCG 13710 ||||||||| || ||||| |||||| | ||||||| ||| ||||| ||| ||||| || Sbjct 204620 ATTGAATTTACGCTTACATCCTTCATAGTTCATGTATCGAATTTTGCCAAAGATTTCGCG 204679 Query 13711 CTCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTT 13770 |||| |||| | |||||||| | ||| || ||||||||||||||| | || ||||| Sbjct 204680 CTCCTTCCAACCCTGATCGTGAATACCGGCGATCGACCACATGCAACCGACGTACCCGTT 204739 Query 13771 GGGATCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGGCGTTGATTAAAGCCAC 13830 |||||||| ||||||| || || ||||| | ||| || || | | || | Sbjct 204740 TGGATCGCGCCCATCCAGGCTATACCGATCGTTAAGATAGATCGCCGTCTCAAGCGCTTC 204799 Query 13831 TGTAGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCCGTG 13890 |||| | | ||| || | ||| ||||| |||||||| || | || | || || Sbjct 204800 CTCGGGCGTTTTCGTCCACTCCAGTATCTTTTTCGCCCAATACATCCGCAGGAAGCCATG 204859 Query 13891 CATTTTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACAATATGTCATGAGTTTC 13950 ||| ||||| | | | | ||| ||| || | |||||||| |||||| |||| Sbjct 204860 CATCTTGCCCTCCTTCACCATCTGCAGCTGCGCCGAGTTCCACAGATCGTCATGCGTTTT 204919 Query 13951 GG 13952 || Sbjct 204920 GG 204921 >seq147 Length=443619 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| ||||| || || || |||||||| | || ||| | |||| |||| || Sbjct 111902 ATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCATCCTCCAGCTG 111843 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || || | ||||| ||||| || ||||||||||| || || || || || Sbjct 111842 CTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 111783 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | ||||| || | || || || || |||| || ||||| || Sbjct 111782 GGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCGAGTGTGATGGTCTTGCCAGT 111723 Query 101446 TAAAGTTTTTACAAATATCTGCATGGTT 101473 | |||||| || || ||||||||| || Sbjct 111722 AAGAGTTTTCACGAAAATCTGCATGTTT 111695 >seq2452 Length=1332465 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||||||||| || || || || || |||||||||| | || | |||| ||| Sbjct 203884 ACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGCGTGCGACCATCCTCC 203943 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| |||| |||||||||||| || ||||| || || ||||| || Sbjct 203944 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTATCCTGG 204003 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| |||| | || || || | || || ||||| || | || || Sbjct 204004 ATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTA 204063 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||||| || || |||||||| Sbjct 204064 CCCGTGAGGGTTTTGACGAAGATCTGCAT 204092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396265490364261