Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1391 264 2e-65 seq2119 159 6e-34 >seq1391 Length=279726 Score = 264 bits (292), Expect = 2e-65 Identities = 866/1323 (65%), Gaps = 56/1323 (4%) Strand=Plus/Plus Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGA 212959 ||| || |||| || | |||||| || || || ||||| | ||| | ||||| ||| || Sbjct 2028 CAGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGA 2087 Query 212960 AGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCAT 213019 ||||| ||||||| || || || || || || || ||||| || || ||||| Sbjct 2088 TGTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCAT 2147 Query 213020 GGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGC 213079 ||||||| ||| | ||| | | ||||||| | || | | |||||| Sbjct 2148 CGGAGCCAACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGC 2207 Query 213080 CCAGTCCCATCTGCCAGACAGGTCCTCG--TCCTTCACGTTCCACATGTCAAACTGCAAG 213137 ||||| |||| ||| ||| | | ||||| ||||||||| || |||||| | Sbjct 2208 CCAGTTCCAT-----AGA---GTCGTAGGCTCCTT---GTTCCACATCTCGTACTGCAGG 2256 Query 213138 ATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGC 213197 ||||||||||| || |||||||||| ||| | ||| || |||| ||||| | Sbjct 2257 ATGCCTTTGCTTACCGGGCTGCCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAAC 2316 Query 213198 TCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTC 213257 |||||| || | ||| || | |||||||||||||| ||||||| ||| || || Sbjct 2317 TCGCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTT 2376 Query 213258 TTGGCCTC------TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 | ||||| | | ||| || |||||| || |||| |||| |||| Sbjct 2377 TGAGCCTCCTCGCTTTCGTACGGATAGCGCATCAAGAT------GAACGCATCGGCCATG 2430 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA---CTTGGAGCACTCCTCC 213368 ||||| || |||||||||||||||||||| | || ||| || ||| ||| |||| | Sbjct 2431 CCCTGCACACCGATGCCGATGGGTCTGTGGCGCATGTTGGAGCGCTT--AGC-CTCCGGC 2487 Query 213369 AAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACA 213428 | ||||| |||| ||| ||||| ||||| || ||||| || | | ||||| || Sbjct 2488 ACAGGGTAGTAGTTAACGTCAATGATTTTGTTCAGATTGCGTGTCACTATTTTGGCCACT 2547 Query 213429 TGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCG 213488 | ||| | | || | || | | || | || || ||| ||| || Sbjct 2548 TCCTTCAGCTTAGCAAAATCGTACGTTTTGTCC---TGCTTTACGAACATGTTCAGCGCA 2604 Query 213489 ATGCTGGCCAGGTTGCAAACGGCCA---CCTCCTGAGAGTCTGTGTACTCCATGATCTCG 213545 || ||| || ||||| || || | | |||| || | |||||||| |||||| Sbjct 2605 ATCGAGGCTAGATTGCACACCGCTATTTCGTCCTTGGA---CGAGTACTCCACAATCTCG 2661 Query 213546 GTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA 213605 |||||||||||| || ||||||||| | |||||| | | ||| || || | || Sbjct 2662 GTGCACAGGTTGGAACACTTGATGGTGCCAATGTTCTGCT-GATTGCTCTTACGATTACA 2720 Query 213606 -GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT 213664 | ||||||||| |||||||| || || || || | ||| ||| | | || Sbjct 2721 CGCATCCTTGTACAGCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAA 2780 Query 213665 CCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTT 213723 ||| |||| |||| ||||| ||| || | | ||| | | | ||||||| Sbjct 2781 CCATAGGT-CCTGCGCCTTCACCTGTCGAAT-AAAGCGACCCTCCT--TCTCGTACCCCG 2836 Query 213724 CGTAGAGCTCGTTGAATTCGTGGCCCCA-GACCCTGTCCAGTCCCGGACAG-GATGCGGG 213781 ||| |||| | ||| || | |||||| || | | ||| ||| |||||| ||| || Sbjct 2837 TGTACAGCTTCTCGAACTCTTCGCCCCACGAATC-GGCCAATCCGGGACAGTCGTGC-GG 2894 Query 213782 ACACATGAGGCTCCA-GTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCC 213840 |||||| || ||||| | | || ||| ||| | || ||||||||| ||||| | || Sbjct 2895 ACACATCAGACTCCACATTTCGTTCGCCTC-GACACGCTTCATGAACAGATCCGGTATCC 2953 Query 213841 ACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGAT 213900 | || ||| |||| ||||| || | | ||| || || | |||||| |||| Sbjct 2954 AGAGGGCGTAAAACATGTCCCGGGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGAT 3013 Query 213901 CTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC 213960 | ||||| || || || || ||||||||||||| | ||||| || || || || |||| Sbjct 3014 CGAGAAACTCGAATATATCTCCGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCC 3073 Query 213961 ---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTA 214017 | ||||| |||||||| || || ||| ||||| | | ||||| | || | Sbjct 3074 GTTTGTTGCCACCCTGGTCGACATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCA 3133 Query 214018 CCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGC 214077 |||| ||||| || |||||| || || | ||| |||| || || | | | | Sbjct 3134 CCAGTCCGTTTGAAATTCCGTTCGTACCAGATATGTACGTTCCCTTCGCGCGGATGCAGT 3193 Query 214078 TCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCT 214137 || | || || || |||||||| | ||||| || | ||| || || | | || | Sbjct 3194 GCACGTTCAGGCCAATACCACCGGCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTAT 3253 Query 214138 CCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGG 214197 | ||| || | || |||||||| | | | |||||| || ||| || ||||||| Sbjct 3254 CGTAGATACCCTCGATACTGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGG 3313 Query 214198 GCC 214200 ||| Sbjct 3314 GCC 3316 >seq2119 Length=1501809 Score = 159 bits (176), Expect = 6e-34 Identities = 284/414 (69%), Gaps = 3/414 (1%) Strand=Plus/Plus Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||| ||||||| || |||||||||| | ||||| || ||||||||| | Sbjct 1234819 CAGCAAACGATCCGCCACAAACTCGATGTACTGCGACATCAGATCACAGTTCATGCCGAG 1234878 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 | | ||||||| ||||| || |||||||||| ||| ||| || || || | | Sbjct 1234879 CATGTCAACGGGCAGTGCCTTCGTCAGAAACTCCTGCTCGATCACGACAGCATCGCGGAT 1234938 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 ||||| | | ||||| || || || || | ||| | |||| | | || || Sbjct 1234939 AATCTCCGTCACGCGCTCCTTCGACGGCTTCTGAACCAGATACTTGA---ACATCAGACA 1234995 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||||||||| | ||| | |||||||| || || ||| |||| |||||| ||| || Sbjct 1234996 GGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCC 1235055 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 |||||| | || | || || |||||||| |||| ||||| ||| ||||||||| Sbjct 1235056 AGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTTCCACTGAAGAAGAT 1235115 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 || || || || || ||||| | || || || || || |||||| ||||| Sbjct 1235116 ACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGCCTTCTTGCTCGAGAT 1235175 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||| || |||||||| ||||||||||| | ||| |||| ||| || ||||| Sbjct 1235176 CCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGC 1235229 Score = 116 bits (128), Expect = 7e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| ||||||||| || || || |||||||| ||||||||| | ||||| Sbjct 1235359 GTACATCTCGCTGTGCACATTTTCCATCGCAATCTGGAAGCCGTAGAAGCAGCGCGCCTC 1235418 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 |||||||| || | ||| | |||| |||||| || || || || ||||| || Sbjct 1235419 CGTTACCTGCACCTCCTGGCTGAAGCGTTCCACCAGATTTTCGTTCACGATGCCATCGGA 1235478 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 ||||||||||||||||| || || | || || |||||| | | | || |||| Sbjct 1235479 CGCAGCAAAGAAGGCAAGCACGTGAGAGATAAAGTGACGCTCGCTCGGTTTCAGCGCATC 1235538 Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 ||| ||| | || ||| ||| || || || ||||| |||||||| || || Sbjct 1235539 CCAATCCTTCATATCCTTGGACAGATCGACCTCCTCCACCGTCCAGAACGAAGC 1235592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931501675160320