Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1391 221 2e-52 seq2119 104 4e-17 >seq1391 Length=279726 Score = 221 bits (244), Expect = 2e-52 Identities = 739/1131 (65%), Gaps = 42/1131 (4%) Strand=Plus/Plus Query 221510 TCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-GC 221568 ||||||| ||||| || ||||| |||||||| ||||| | | ||||||| ||| || Sbjct 2422 TCGGCCATGCCCTGCACACCGATGCCGATGGGTCTGTGGCGCATGTTGGA-GCGCTTAGC 2480 Query 221569 TTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTT 221628 || ||||| || || |||| ||||| || | ||||| || || | || | | ||| Sbjct 2481 CTCCGGCACAGGGTAGTAGTTAACGTCAATGATTTTGTTCAGATTGCGTGTCACTATTTT 2540 Query 221629 AACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTC 221688 |||| || ||||||| | || || ||| ||| || | || Sbjct 2541 GGCCACTTCCTTCAGCTT----------AGCA--AAATCGTA--CGTTTTGTCCTGCTTT 2586 Query 221689 CACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGT 221748 || || ||| || |||| ||| || || ||||| || | ||||||||| | Sbjct 2587 -ACGAACATGTTCAGCGCAATCGAGGCTAGATTGCACACCGCTATTTCGTCCTTGGACGA 2645 Query 221749 ATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATT 221808 |||| | ||||| || || |||||| ||||||||||| || | || | ||||| Sbjct 2646 GTACTCCACAATCTCGGTGCACAGGTTGGAACACTTGATGGTGCCAATGTTCTGCTGATT 2705 Query 221809 AGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGC 221868 ||| ||||| || |||||||| ||||| | || | || || || | ||| | Sbjct 2706 GCTCTTACGATTACACGCATCCTTGTACAGCATGTACGGTACACCCGTTTCAACCTGCGA 2765 Query 221869 CACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACC-GTCCTCTTGACTGCACCCTCG 221926 | | | || ||| || || ||| || ||||| ||| | | | |||||| Sbjct 2766 CTCGATGATAGCAAACCATAGGTC-CTGCGCCTTCACCTGTCGAATAAAGCG-ACCCTC- 2822 Query 221927 GTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCT 221986 ||| || ||||| || || ||| | || |||| ||| || ||| ||| ||| || Sbjct 2823 --CTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCG 2880 Query 221987 GGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAG 222046 ||||| | ||||||||||||||||| | ||| | | ||| | || |||||| Sbjct 2881 GGACAGTCGTGCGGACACATCAGACTCCACATTTCGTTCGCCTCGACACGCTTCATGAAC 2940 Query 222047 AGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTG 222106 || ||||| ||||| || || | ||| | || | || ||| ||| || |||| || Sbjct 2941 AGATCCGGTATCCAGAGGGCGTAAAACATGTCCCGGGCTCGCACCTCTTCTTTGCCGGTG 3000 Query 222107 TTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCC 222166 |||||| | ||||| | |||||| || || || ||||||||||||| ||||||| || Sbjct 3001 TTTTTCTTAAGATCGAGAAACTCGAATATATCTCCGTGCCACGGCTCGAGATAGATAGCG 3060 Query 222167 AGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATG 222226 | || || || || |||||||||||||| || || || || | |||| | | | Sbjct 3061 AACGCTCCAGGCCGTTTGTTGCCACCCTGGTCGACATACCGTGCCGTATTGTTGTACACG 3120 Query 222227 CGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCG 222286 || | |||| ||||||||||| || ||||| || || ||||||| || Sbjct 3121 CGCAACATCGGCACCAGTCCGTTTGAAATTCCGTTCGTACCAGATATGTACGTTCCCTTC 3180 Query 222287 GCCCTCAGGTTACTG-GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCG 222343 || | || | | | ||| || ||| ||||||||||| ||| || || | ||| Sbjct 3181 GCGC---GGATGCAGTGCACGTTCAGGCCAATACCACCGGCAGATTTGGAAATAAGGGCA 3237 Query 222344 CAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAA 222403 || |||||| || || ||| ||||| ||| ||| || | | ||||||||||| Sbjct 3238 CACTGCTTGAGCGTATCGTAGATACCCTCGATACTGTCATCGGACATGGTCAGCAGAAAA 3297 Query 222404 CAAGACGACATCTGAG---ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGT 222460 || || |||| ||| | | |||| | | || ||||| || || || || Sbjct 3298 CAGGAAGACAGCTGGGGCCGCTGCGTGG--CCGCCG-CAAACATGGTCGGTGAAGCATGG 3354 Query 222461 GTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCG 222520 || ||||||| | |||| ||||| |||||| || | || |||||| || ||| Sbjct 3355 GTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGATCGCTGCATCGATGTCTTCGCCG 3414 Query 222521 TGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACA---GGACCCTTG 222577 || || |||||| | ||| ||||| ||| |||| ||| ||| |||||| Sbjct 3415 TGGATACCGATGGCGACGCGCATCAGCATGTGCTGTGGCCGCTCGACAATCTTACCCTT- 3473 Query 222578 GAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTG 222628 || || |||| |||||| ||||| || || || || || |||||| Sbjct 3474 GATCT--TCAGCAAATACGATCGTTCCAAGGTTTTAAATCCGAAATAGTTG 3522 >seq2119 Length=1501809 Score = 104 bits (114), Expect = 4e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCT-ATCCA 25570 |||||| | || ||| | |||||| ||||||| ||| | | ||| | || || | | Sbjct 1235584 CTGGACGGTGGAGGAGGTCGATCTGTCCAAGGATATGAAGGATTGGGATGCGCTGAAACC 1235525 Query 25571 AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAG 25630 || ||||| || ||| || ||||| | || |||||||| || || ||||| || | Sbjct 1235524 GAG-CGAGCGTCACTTTATCTCTCACGTGCTTGCCTTCTTTGCTGCGTCCGATGGCATCG 1235466 Query 25631 TGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTT 25690 ||||||| |||||| || | |||| | ||| |||||| |||||| || | Sbjct 1235465 TGAACGAAAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGGTAACGGAGGCGCGCTGCT 1235406 Query 25691 TCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736 ||||||| |||||||| || || |||||||||||| ||| |||| Sbjct 1235405 TCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGCGAGATGTA 1235360 Score = 95.1 bits (104), Expect = 2e-14 Identities = 233/349 (67%), Gaps = 7/349 (2%) Strand=Plus/Minus Query 25775 AGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGT 25834 |||||| || |||||| |||||||| | || || | |||| |||||| | Sbjct 1235247 AGAGAGTTC--CTGTTTAACGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACT 1235190 Query 25835 GGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 |||| |||| |||||| ||| ||| || | |||||||| ||| | || || |||| Sbjct 1235189 GGGCACTGAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAACGGGTTGTGGCGTTTG 1235130 Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGA 25954 | || || || || ||||| ||||| || || || | ||||||||||| ||| || Sbjct 1235129 CCGCCGTTGAAGGTATCTTCTTCAGTGGAAGCTTCGCTTCAATCTTCTGGCTGAAGAAGC 1235070 Query 25955 AGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCC 26014 || ||||| || || ||| || |||||||| || | ||||| || || | Sbjct 1235069 GTGGCCTGATGCCTGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTAC 1235010 Query 26015 ACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGA 26074 || | || |||||||| ||| | | || | | || | || || || || | ||| Sbjct 1235009 ACTGTGACTTTGCCTGTCTGATGTTCAAG---TATCTGGTTCAGAAGCCGTCGAAGGAGC 1234953 Query 26075 CCGTCTACAG-TATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTC 26122 ||| || | || ||| || ||||| | ||||||| ||||||||| Sbjct 1234952 GCGT-GACGGAGATTATCCGCGATGCTGTCGTGATCGAGCAGGAGTTTC 1234905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928813764973120