Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_020082.1 Length=42746 Score E Sequences producing significant alignments: (Bits) Value seq1673 150 5e-32 seq1744 111 4e-20 seq854 104 6e-18 seq1639 86.0 2e-12 >seq1673 Length=1308 Score = 150 bits (166), Expect = 5e-32 Identities = 371/555 (67%), Gaps = 11/555 (2%) Strand=Plus/Minus Query 24469 GCTGTCATCGTCGATGGTGGAACGGACGTGGATGTGGCGTTGGCGTGCTACCTGaaaaa- 24527 || ||||||||||| ||||| || | |||||||| ||| ||| ||||| || Sbjct 688 GCCGTCATCGTCGACGGTGGGGTCGATGCAGATGTGGCCATGGGTATCTATCTGAAGAAG 629 Query 24528 aaCCCGGGAGTCGCGATGTACCAAGCAGGAACCCCTGTCACGATTGAAGTCACATCGCCG 24587 ||||| || | | | |||| || || ||||| || | | | || || || |||||| Sbjct 628 AACCCTGGCGCCAGGCTGTATCAGGCGGGAACACCATTTGAGGTAGAGGTAACGTCGCCG 569 Query 24588 AAATACCCGTCAAACAAGAAGGTCATCAAGTTCAGTCGCCCCAACTATGTGGACATGAAC 24647 || |||||| | ||||||||||| ||| | || || || | ||| || ||||||||| Sbjct 568 AAGTACCCGACCAACAAGAAGGTAATCCGGGCGAGCCGGCCTATCTACGTCGACATGAAC 509 Query 24648 ATTGTAGTCACCATTAAGAACGATGGCACGTTGCCGAGTAACGTCG--ATGGTGAGGTGA 24705 || | ||||||| ||||| |||||| ||||| | || ||| | | | | | | Sbjct 508 ATGGCGATCACCATCGTCAACGACGGCACGCTGCCGTCTGACATCGACACGCTCA--TCA 451 Query 24706 AGCAGGCCATTTTCGATTATGCCGCCGGCGGTCTGATTCCTACAGATGTCGGTTTCAAAG 24765 || | || | | || | || ||||||| || ||||| | ||||| || |||||| Sbjct 450 AGGAAGCGGTCATGGAGTTCGCAGCCGGCGACCTAATTCCGGCGGATGTTGGCTTCAAAA 391 Query 24766 TCGACGGGTTCGACATCGGGGAAGAAGTACCGTATACCACACTTTTCACACCTGTCAACA 24825 | ||| ||||| || || || ||| || | | ||| | ||||| || |||||| Sbjct 390 TTAGCGGATTCGATATTGGCGAGACAGTGCCATTCAGCACGATGTTCACGCCGATCAACA 331 Query 24826 AGGTGATAGGTGCTTACGGTAACAGTTATGTACAGGACATGACGCTTAACGGCGTGCGCA 24885 ||||||| || | || || || || ||||| | ||| || |||| || Sbjct 330 AGGTGATCGGATCCTATGGCAATAGCTATGTTTCCCTTCTCCAGCTGAATGGCGCGCAGG 271 Query 24886 TCAACGCGCCGATAGCGTTCAATCAGTTATCACGATGG-TTGACATCTAACATCACGGTG 24944 |||| | | || |||| ||| ||| | ||||| ||| || | ||||||||| ||| Sbjct 270 CGAACGTGGCAATCGCGTACAACCAGATGTCACGCTGGACCGAGA-GTAACATCACCGTG 212 Query 24945 AACGTCGTATGACTTTAAC--CCCAGACCGTATTTACGCACAGTATCGTAATCAGCCTAA 25002 ||| ||| | ||| || || || |||||||||||||| || || |||| || Sbjct 211 GTAGTCACCTGA--TGAACATTCCGGATCGCATTTACGCACAGTACCGAAACAAGCCGAA 154 Query 25003 AGCTATCTCGTGGTA 25017 ||| | | ||||| Sbjct 153 GGCTGTGGCTTGGTA 139 >seq1744 Length=1191 Score = 111 bits (122), Expect = 4e-20 Identities = 209/305 (69%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 10008 TATGACGGTGTGACCATGGGTAAGTTTATCGGTGCAAATGGTCAAGACCTGCCGCGCGTC 10067 || |||| || ||||| || || || ||||| | | | | ||||||||| ||| Sbjct 13 TACGACGCCGTCACCATCGGCAAATTCATCGGCTCCAGCGCCGACGACCTGCCGAACGTT 72 Query 10068 GCACAGTCTGCGCAAATGCACACTGTGCCGTTGGGTTACGCCGGCAACGAGTGTCATTAC 10127 || | ||| || | | | | |||||| | || |||||||||||| || | ||| Sbjct 73 GCGCTGTCCGCCAACAAGTCGTCCGTGCCGATCGGCTACGCCGGCAACATGTACGACTAC 132 Query 10128 ACTCTGGACGAAATGCGCAAGTCCGCCGC-GATGAACATGCCTATCGACGCTGAACAGGC 10186 | ||||||||| |||||||||| || || | || ||| ||| | ||| | |||| Sbjct 133 AGCCTGGACGAACTGCGCAAGTC-GCAGCAGCTGCGCATCCCTCTGGACACCACCAAGGC 191 Query 10187 TCGTCTGGCGTTCCGTGGTGCGGAAGAGCATTCACAAAGCGTGGCTTACTTCGGTGATTC 10246 ||| ||| ||||| ||||| | ||||| | || |||| || |||||||| ||| | Sbjct 192 GCGTGCGGCCTTCCGCGGTGCTCAGGAGCACACCCAGCGCGTTGCGTACTTCGGCGATGC 251 Query 10247 GTCTCGTGGTATGTACGGCCTGTTCAACAACCCGAACGTCACGCTGTCAAGCGCGACCAA 10306 | || |||||| ||| |||||||||||||||| | | |||| | | ||| | Sbjct 252 AGCGCGCGGTATGACTGGCGCGTTCAACAACCCGAACCTGGCCTTGTCGAACTCGATCCT 311 Query 10307 GGACT 10311 ||||| Sbjct 312 GGACT 316 >seq854 Length=8426 Score = 104 bits (114), Expect = 6e-18 Identities = 332/504 (66%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 16474 ATTCTCGACCTGTCCGACGCTGACCGTAACGCGCACAAGTCCGCACCAATTCGGATGCGT 16533 || ||||||||||| ||||| || || ||||| | ||||| || || | || || || Sbjct 8425 ATCCTCGACCTGTCGGACGCCGATCGAAACGCCCGTAAGTCGGCGCCGCTGCGCATCCGC 8366 Query 16534 CTGTTCCGTTCTGGTTCCATCTGGGTTGTCGAAGTCGACGTAGACGTATTCTAAGGGGTT 16593 |||||||| | || ||||| |||||||| ||||| | ||||| | || | ||| Sbjct 8365 CTGTTCCGCGCAGGCGCCATCCACGTTGTCGATGTCGATCTCGACGTTTACTGATAGGTG 8306 Query 16594 AAACGAGATG-GCTTTCGAAAACTTTTCCAACGACAACACTGTAATCACAGTTAACGGTC 16652 | || ||| || | | |||||||| | ||| || |||| || ||||||| Sbjct 8305 ATCTGA-ATGAGCCTGAG-CAACTTTTCGACAGACCTGTTCGTCGTCACCGTCAACGGTC 8248 Query 16653 GGTCAATCACCGATTGGGGACAGCAAGACCCGC-CCAT-CAGCATGGCACCAATCGACCC 16710 || ||| || ||||| || | | || | |||| || | || || |||||| | Sbjct 8247 GGCAGATCCAGGACTGGGGCGAG--ACATCCACTCCATACACCGACGCGCCCATCGACGC 8190 Query 16711 CGCAAGCGTCGTGCGTCGTGGCGTCGGTGGTAATGCTGTCCGTCTGGACCGTAAGAACCC 16770 | ||| |||| || ||| || || || || || || |||||||| | || | Sbjct 8189 CAAGAGCCAGCTGCGCCGGGGCCAGGGCGGCAACGCAGTGCGCCTGGACCGCATCAA-TC 8131 Query 16771 CGGTGCGCGCGTGACAC-TATATCTGAACCCTGGCAGTTCGGACGCCGCTTATCTGCGTG 16829 ||| ||||| | | || | || || |||||||| | | || | || || ||| | Sbjct 8130 CGGGGCGCGAGGTAAACATCTACCTCAACCCTGGTTCTCCAGATTCGGCCTACATGCAAG 8071 Query 16830 GTTTGTTCAACTCTAAGTCGAACATCACTTTCACGTACACGCAGATTGGCACTGCTGAAA 16889 | |||||||||| || | ||| | || | || || ||||| ||||| |||| Sbjct 8070 GCCTGTTCAACTCGAACGCCAACGTTACCGTATCGGTAACCCAGATCGGCACCCTCGAAA 8011 Query 16890 ACACCATTAACACCGAAGGTGCTATCGTCAACGTCGGCGAGCGTGGTCGCGGTGGTGCAA 16949 || || | | || || | |||||||||| ||| |||| |||||||| || || Sbjct 8010 CGGCCCTTGGCTCTGAGGGGGTGATCGTCAACGATGGCCAGCGCGGTCGCGGCGGCTCA- 7952 Query 16950 GTAGTATTACCGACGAACAATTCA 16973 | || |||||||| ||||||| Sbjct 7951 --ACCATCACCGACGATCAATTCA 7930 >seq1639 Length=1372 Score = 86.0 bits (94), Expect = 2e-12 Identities = 406/635 (64%), Gaps = 15/635 (2%) Strand=Plus/Minus Query 8108 CATTACTCGCCGTGAATATACGGACGAGGGGTTTCTGCGTGTACCGGGACATGTGGCGCG 8167 |||||| | | ||||| || |||||||| || || || ||||| | ||||| | Sbjct 1195 CATTACCCAAAGGGAATACACCGACGAGGGATTCCTCAAGGTGCCGGGCCGCGTGGCCAG 1136 Query 8168 CACGGGGATTCAGGAATATCTCGCCTCTGAACTTGGTCTGAACGACCGAAACCCTAACGA 8227 || |||||||||||||| || ||| ||| || || |||| | | ||||| Sbjct 1135 GACCGGGATTCAGGAATACCTGGCCCGTGAGCTGCAACT---CGACGGCGATCCTAATCG 1079 Query 8228 TATTATCCGCGTTTATCGTCCCAGTGATGAAGTCTTTAACAGCAAATCTCTACTGTCTTA 8287 ||| |||| ||||| || || || || || || ||| || ||||| | || Sbjct 1078 TATCGTCCGGGTTTACCGGCCGCCCGAAGAGGTGTTCAACGACACCTCTCTGAGCACCTA 1019 Query 8288 TGACGGTGTGGACA-TCACACTCGAACATCCTAACGGTCTCGTAAACGCCGACAACTTCC 8346 ||||| | | ||| |||| || || || || | || || | || ||| | || | Sbjct 1018 CGACGGCGCG-ACAGTCACGAATGACCACCCCAAAGAACTGGTCA-CGTCGAAGAATTAC 961 Query 8347 GTAAAACCA---CGGTTGGGGTGGTGCGTGGTAAAGGTCGTCAATACGGCGAGTTCGTAG 8403 || || | || || | ||| || ||| || || | |||| || ||||| Sbjct 960 --AAGTCCGTATCTGTCGGCGAGGTTCGCGGTCCTGGCCGGCGCGACGGTGATTTCGTTC 903 Query 8404 AGTGTGACCTAATCGTTAAAGATAAGGCGGCGATTCAGTCCGTACAGTCTGGTAAATGCG 8463 || || || ||| | || ||| || | | || | | | | | || || |||| Sbjct 902 TCTGCGATCTGATCATCAAGGATCAGAAGACCATCGACGACATCAACGCCGGAAAGTGCG 843 Query 8464 AACTGTCGGCAGGTTATACCGCGTCGTACGATTACGAACCGGGAGAGACGCCGGAAGGTG 8523 | || || || || || ||||| |||| |||| || || | || | || || Sbjct 842 AGCTATCCGCCGGATACACCGCCGAATACGTGTACGGGCCTGGCGTTACCGCCGACGGCC 783 Query 8524 AACCGTACGATTACATCCAGCGTGACATCAAGATTAACCATGTCGCGATTGTTGGCCGCG 8583 | ||||| |||| |||||| |||||| || ||||| ||| | || | | Sbjct 782 AGGACTACGAATACACCCAGCGCAACATCATCATCAACCACCAAGCGGTGGTCACCAAAG 723 Query 8584 CTCGTGCCGGTCGCAACGCGCGTATTCTCGACCACAAACC-GGAGGGCACTCGAATGCCT 8642 | | || || | | ||| || || ||||| ||| || ||||| || ||| ||||| Sbjct 722 CGAGAGCGGGCGGAATCGCTCGCGTTTTCGACACCAACCCAGGAGGCAACACGA-TGCCT 664 Query 8643 GTAATGATTACTACCGATAGCGGGCGTAGCGTCGATGTTGCCGACCCGAACAACGCACAG 8702 ||| | || || |||||||||||||| ||||| |||||||| || || ||||| ||| Sbjct 663 GTACTTATCACCACCGATAGCGGGCGCAGCGTTGATGTTGCTGATCCTGCGAACGCCCAG 604 Query 8703 GTTGTTGCTGATGCGTTTGACCGC--GCTGTAGCG 8735 | || || || |||| || ||| |||| |||| Sbjct 603 CTGGTCGCCGACTCGTTCGATCGCCTGCTGAAGCG 569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136661261977608