Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_020204.1 Length=48814 Score E Sequences producing significant alignments: (Bits) Value seq1673 95.1 4e-15 >seq1673 Length=1308 Score = 95.1 bits (104), Expect = 4e-15 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 47604 GTACCTGTCAGCGCGCAAATCACGTCGAGGTCGTAGCCGCT-GGCTTTGTTCGGGTCTTT 47662 || || || || | ||| | | |||||| ||| |||| || ||| |||||||||||||| Sbjct 1164 GTGCCAGTGAGAGAGCAGACAATGTCGAGATCG-AGCCCCTTGGCCTTGTTCGGGTCTTT 1222 Query 47663 GGAGTTGTACGCCTGTTGTAATACCTCATCGAGCGCGGAGAAGATTTCAGCATCATGTGC 47722 ||||| || |||||| | | ||||||||| ||| ||||||| || || || || || Sbjct 1223 CGAGTTATAGGCCTGTAGCAGGGTCTCATCGAGGGCGTAGAAGATCTCGGCGTCGTGAGC 1282 Query 47723 AATCTTCAACCCATCGGGGGTGGA 47746 ||||||| |||||| || || || Sbjct 1283 CATCTTCAGCCCATCAGGCGTTGA 1306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156078245626576