Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1920 170 3e-37 >seq1920 Length=889085 Score = 170 bits (188), Expect = 3e-37 Identities = 351/520 (68%), Gaps = 4/520 (1%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || |||||||| || ||||| || || ||| || || | ||| | |||||| ||||| Sbjct 343092 CCCGTGGCAATGACGAAATCTTCCGGCCGTTCCTGCTGCATCATCAGCCACATCGCCTCA 343151 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 || ||||| | || || ||||||||||| || || ||||| || || | | | | Sbjct 343152 ACGTAATCCTTCGCGTGGCCCCAGTCACGCTTTGAGTCGAGATTGCCCAGCTCCAGATAT 343211 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTT--AATGCTCTTGTAATCTTACGAGTTACAAAAG 47965 || |||| ||| || || |||| | | | || || || || || |||||| Sbjct 343212 TCCTGCTGACCGAGCGAAAT--CTTTGCCACCGAACGGGTGATTTTGCGCGTCACAAAAT 343269 Query 47966 TTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGT 48025 | || || || | || || || ||||| || || || ||| | ||||| |||| ||| Sbjct 343270 TCTCCCCGCGGCGCGGTGACTCGTGATTGAACAGGATGCCATTGCAGGCGAACATATCGT 343329 Query 48026 ATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAG 48085 | | |||||||||||| |||| ||||||||||| || | || ||| | | || || | Sbjct 343330 ACGCTTCACGATAGTTGATTACAATCCAGTACCCGTACATCTTCGCACAAGCGTACGGCG 343389 Query 48086 AACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTT 48145 | || |||||||| || || |||| |||| || ||||| |||||| || || |||| Sbjct 343390 AGCGGGGATAGAACGGGGTCTTCTCGTTCTGCGGCGTCTCCACCACCTTCCCGTACAGTT 343449 Query 48146 CACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCCT 48205 | ||||| || || |||| || ||| | | |||| | | | ||| | || | Sbjct 343450 CCGACGTGGACGCCTGGTAGAAGCGCACCGTCTTTTCCTGCCCCACGGTACGAATCGCAT 343509 Query 48206 CAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACG 48265 | |||| | || || || | ||||| || | || || ||| || || |||| Sbjct 343510 CGAGCAACCGTAGCGTACCGACTGCATCCACCTCGGCCGTGTATTCGCTCAGATCGAACG 343569 Query 48266 AAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305 ||| ||| || || ||||| || | |||||||| ||||| Sbjct 343570 AAATCTTGACGTGGCTCTGGGCGGCCAGATTATATATCTC 343609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665472164168360