Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2523 98.7 1e-15 >seq2523 Length=22734 Score = 98.7 bits (108), Expect = 1e-15 Identities = 130/175 (74%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 13538 AAGTCCAAAATTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAA 13597 |||||||| || | ||||| |||||| |||| ||||| ||| | || ||| || | ||| Sbjct 17140 AAGTCCAAGATCAAGGGTATCCCCAAGCTGGAGGACGCCAACGATGCCGGTTCG-CGCAA 17198 Query 13598 TCTGGA-AAGTGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGC 13656 | | || ||||| ||||| | || ||||| || || || ||||| ||||| || | Sbjct 17199 TTCGCTCAACTGTACGCTCATCCTTACCGAGGGAGACTCAGCCAAAACGCTCGCCGTGTC 17258 Query 13657 GGGTCTCTCTGTCGTTGGTCGTGATCAC-TACGGTGTGTTCCCACTTCGCGGTAA 13710 || || ||| || |||||||| ||| ||||||||||| || || |||||||| Sbjct 17259 CGGGCTGGGTGTGGTCGGTCGTGA-CACGTACGGTGTGTTTCCGCTGCGCGGTAA 17312 Score = 93.3 bits (102), Expect = 5e-14 Identities = 236/354 (67%), Gaps = 4/354 (1%) Strand=Plus/Plus Query 14432 AAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTACCACCATGGTGAAGTA 14491 |||||||| || ||||| | | || ||||| ||||| || ||||| || ||||| || Sbjct 18076 AAGGTGGCCCAGCTGGCAGGTTCGGTGGCGGAAAAGTCCGCCTACCATCACGGTGAGGTG 18135 Query 14492 TC-CTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACACGGGTTCAAACAACATTAA 14550 || || || |||||| || || |||| | | ||| ||| |||||||| || Sbjct 18136 TCGCTCTGCTC-CACGATCGTCAACCTGGCGCAGAATTACGTTGGTAGCAACAACATCAA 18194 Query 14551 CCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGGTGGTAAGGATGCTTCTCA 14610 || || | ||| ||||||| || |||||||| || | ||| || ||||| | || Sbjct 18195 TCTGCTGTATCCGGGTGGTCAGTTCGGTACGCGCCTGACGGGCGGCAAGGACAGCGC-CA 18253 Query 14611 GACG-AGGTACATTTTCACAAAACTTACCAAGGAGGCTCGCAAGATCTTTGATCCTCGGG 14669 | | |||||||| ||||||| ||| || | | || | ||||| |||| | || Sbjct 18254 GTCCTAGGTACATCTTCACAATGCTTTCCGCCCTGACGCGACACATCTTCCATCCGCTGG 18313 Query 14670 ATGACCCGATCCTCAACTACTTGGACGATGATGGACGCTCCATTGAACCAGACTTTTACA 14729 | || || | | | ||| || |||||| | ||| ||||| | || || Sbjct 18314 ACGATCCACTGTTAGAGTACCAGGTCGATGACAATCTGCGCATCGAACCTGTCTGGTATC 18373 Query 14730 TGCCAACTTTACCAATGGTTCTCGTGAATGGAACCGAGGGTATCGGTACGGGTT 14783 |||| | |||| ||||| || || || || | || ||||||||||| |||| Sbjct 18374 TGCCGATCATACCGATGGTGCTGGTCAACGGTGCGGAAGGTATCGGTACCGGTT 18427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596549667118240